RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 PDXPQ96GD0 296 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 CA5BQ9Y2D0 317 aa11.45□□□□□ -0.58
SMAD9-201ENST00000350148 NUP205Q92621 2012 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 SHROOM3Q8TF72 1996 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 SDC3O75056 442 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 OR5F1O95221 314 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 ARF1P84077 181 aaKnown RBP11.44□□□□□ -0.58
SMAD9-201ENST00000350148 CCDC58Q4VC31 144 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 SMARCD3Q6STE5 483 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 SPRED1Q7Z699 444 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 VTCN1Q7Z7D3 282 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 SNX29P2Q8IUI4 249 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 SLC6A18Q96N87 628 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 IL4I1Q96RQ9 567 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 METTL8Q9H825 291 aaKnown RBP11.44□□□□□ -0.58
SMAD9-201ENST00000350148 DDX31Q9H8H2 851 aaKnown RBP11.44□□□□□ -0.58
SMAD9-201ENST00000350148 LTB4R2Q9NPC1 389 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 PLD2O14939 933 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 TRIM23P36406 574 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 NSDHLQ15738 373 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 OR14A16Q8NHC5 309 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 WDR34Q96EX3 536 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 SLC41A3Q96GZ6 507 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 CHCHD6Q9BRQ6 235 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 SORBS1Q9BX66 1292 aaKnown RBP11.44□□□□□ -0.58
SMAD9-201ENST00000350148 C6orf106Q9H6K1 298 aaPredicted RBP11.44□□□□□ -0.58
SMAD9-201ENST00000350148 B3GAT2Q9NPZ5 323 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 FAM172BPA6NC97 362 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF726A6NNF4 738 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 HLA-DPB1P04440 258 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 CD2P06729 351 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 RORCP51449 518 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 HSD11B2P80365 405 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 C1orf189Q5VU69 101 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 HAGHLQ6PII5 290 aaPredicted RBP11.44□□□□□ -0.58
SMAD9-201ENST00000350148 HAVCR2Q8TDQ0 301 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 ITPKCQ96DU7 683 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 FEVQ99581 238 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 MKRN2Q9H000 416 aaKnown RBP11.44□□□□□ -0.58
SMAD9-201ENST00000350148 CUTCQ9NTM9 273 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 PCDH10Q9P2E7 1040 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF182P17025 639 aaPredicted RBP11.44□□□□□ -0.58
SMAD9-201ENST00000350148 DCKP27707 260 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 BCL6P41182 706 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 CCINQ13939 588 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 CNDP2Q96KP4 475 aaKnown RBP11.44□□□□□ -0.58
SMAD9-201ENST00000350148 KCTD7Q96MP8 289 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 OR7D2Q96RA2 312 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 RBCK1Q9BYM8 510 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 PLA2G2FQ9BZM2 168 aa11.44□□□□□ -0.58
SMAD9-201ENST00000350148 A0A0A6YYC8 382 aaPredicted RBP11.43□□□□□ -0.58
SMAD9-201ENST00000350148 OR6C70A6NIJ9 312 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 NPIPA5E9PKD4 350 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 I3L1I5 382 aaPredicted RBP11.43□□□□□ -0.58
SMAD9-201ENST00000350148 RPS15P62841 145 aaKnown RBP11.43□□□□□ -0.58
SMAD9-201ENST00000350148 DCST2Q5T1A1 773 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 OR4N5Q8IXE1 308 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 TCEANCQ8N8B7 351 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 OR4K5Q8NGD3 323 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 OR2AJ1Q8NGZ0 328 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 OR5J2Q8NH18 312 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 TFAP2CQ92754 450 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 MAL2Q969L2 176 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 COX14Q96I36 57 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 NCDNQ9UBB6 729 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 NPIPA1Q9UND3 350 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 LRIT2A6NDA9 550 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 SGK494L7N484 410 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 MBTPS2O43462 519 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 SLC35E2P0CK97 266 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 UBL4AP11441 157 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 PROX2Q3B8N5 592 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 CLEC12AQ5QGZ9 265 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 FAM131AQ6UXB0 335 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 OR7G1Q8NGA0 311 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 C15orf40Q8WUR7 153 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 TCEAL3Q969E4 200 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 ZNF385DQ9H6B1 395 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 RHCGQ9UBD6 479 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 GRHPRQ9UBQ7 328 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 FTSJ1Q9UET6 329 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 NXT1Q9UKK6 140 aaKnown RBP11.43□□□□□ -0.58
SMAD9-201ENST00000350148 SLC22A31A6NKX4 558 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 TBX19O60806 448 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 INMTO95050 263 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 ITGA3P26006 1051 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 EPHA4P54764 986 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 PPP1R8Q12972 351 aaKnown RBP11.43□□□□□ -0.58
SMAD9-201ENST00000350148 MADCAM1Q13477 382 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 DLEU7Q6UYE1 221 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 FRRS1Q6ZNA5 592 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.43□□□□□ -0.58
SMAD9-201ENST00000350148 ADAMTS16Q8TE57 1224 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 CENPOQ9BU64 300 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 ICKQ9UPZ9 632 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 KMT5CQ86Y97 462 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 METTL27Q8N6F8 245 aaPredicted RBP11.43□□□□□ -0.58
SMAD9-201ENST00000350148 ANKRD19PQ9H560 264 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 TBC1D29Q9UFV1 150 aa11.43□□□□□ -0.58
SMAD9-201ENST00000350148 KHNYNO15037 678 aaKnown RBP11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms