RNA–Protein interactions for RNA: ENST00000350028.4

SAMM50-201, Transcript of SAMM50 sorting and assembly machinery component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SAMM50, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SAMM50-201ENST00000350028 PRICKLE2Q7Z3G6 844 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 SLCO6A1Q86UG4 719 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 ZNF619Q8N2I2 560 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 TCEANCQ8N8B7 351 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 PIGXQ8TBF5 258 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 LMX1AQ8TE12 382 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 TCTN2Q96GX1 697 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 PRR14Q9BWN1 585 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 POLR2J2Q9GZM3 115 aaKnown RBP15.57■□□□□ 0.08
SAMM50-201ENST00000350028 TBC1D23Q9NUY8 699 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 BLACEA4D250 179 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 EFCAB9A8MZ26 197 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 CHST10O43529 356 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 RDH16O75452 317 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 PTHP01270 115 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 PROS1P07225 676 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 RPS4Y1P22090 263 aaKnown RBP15.57■□□□□ 0.08
SAMM50-201ENST00000350028 TRHRP34981 398 aaPredicted RBP15.57■□□□□ 0.08
SAMM50-201ENST00000350028 UGT2B10P36537 528 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 MAP3K8P41279 467 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 PCYT1AP49585 367 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 C21orf59P57076 290 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 RACK1P63244 317 aaKnown RBP15.57■□□□□ 0.08
SAMM50-201ENST00000350028 EEF1A1P68104 462 aaKnown RBP15.57■□□□□ 0.08
SAMM50-201ENST00000350028 DCST2Q5T1A1 773 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 ZNF836Q6ZNA1 936 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 RASSF6Q6ZTQ3 369 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 COX18Q8N8Q8 333 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 OR9A4Q8NGU2 314 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 NDNFQ8TB73 568 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 DYNC2LI1Q8TCX1 351 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 ACOT11Q8WXI4 607 aaPredicted RBP15.57■□□□□ 0.08
SAMM50-201ENST00000350028 CTHRC1Q96CG8 243 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 VMP1Q96GC9 406 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 GPA33Q99795 319 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 PALMDQ9NP74 551 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 POLE3Q9NRF9 147 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 TVP23BQ9NYZ1 205 aa15.57■□□□□ 0.08
SAMM50-201ENST00000350028 AIREO43918 545 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 COQ9O75208 318 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 IL9P15248 144 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 STAT5AP42229 794 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 CLK1P49759 484 aaKnown RBP15.56■□□□□ 0.08
SAMM50-201ENST00000350028 MLLT10P55197 1068 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 NCS1P62166 190 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 MAP4K2Q12851 820 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 GPR68Q15743 365 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 DEFB110Q30KQ9 67 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 ARMCX4Q5H9R4 360 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 DEFB119Q8N690 84 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 SLC41A3Q96GZ6 507 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 TMEM80Q96HE8 168 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 SLC38A3Q99624 504 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 EVA1AQ9H8M9 152 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 DNAJC27Q9NZQ0 273 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 TMEM131Q92545 1883 aa15.56■□□□□ 0.08
SAMM50-201ENST00000350028 NADKO95544 446 aaPredicted RBP15.55■□□□□ 0.08
SAMM50-201ENST00000350028 CT62P0C5K7 136 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 RNH1P13489 461 aaKnown RBP15.55■□□□□ 0.08
SAMM50-201ENST00000350028 CSTF2P33240 577 aaKnown RBP eCLIP15.55■□□□□ 0.08
SAMM50-201ENST00000350028 CAPZBP47756 277 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 OMPP47874 163 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 TUBA1BP68363 451 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 POU6F2P78424 691 aaPredicted RBP15.55■□□□□ 0.08
SAMM50-201ENST00000350028 LSM11P83369 360 aaKnown RBP eCLIP15.55■□□□□ 0.08
SAMM50-201ENST00000350028 RNLSQ5VYX0 342 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 PTCRAQ6ISU1 281 aaPredicted RBP15.55■□□□□ 0.08
SAMM50-201ENST00000350028 TUBA1AQ71U36 451 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 GDF7Q7Z4P5 450 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 ARHGAP22Q7Z5H3 698 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 MRGPREQ86SM8 312 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 ADCK1Q86TW2 530 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 RANBP3LQ86VV4 465 aaPredicted RBP15.55■□□□□ 0.08
SAMM50-201ENST00000350028 IQCF1Q8N6M8 205 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 TEX47Q8TBZ9 253 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 GPR151Q8TDV0 419 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 ADAMTS18Q8TE60 1221 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 HOXB13Q92826 284 aaPredicted RBP15.55■□□□□ 0.08
SAMM50-201ENST00000350028 RPL3LQ92901 407 aaKnown RBP15.55■□□□□ 0.08
SAMM50-201ENST00000350028 NELL2Q99435 816 aa15.55■□□□□ 0.08
SAMM50-201ENST00000350028 KIAA0513O60268 411 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 OR10H2O60403 315 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 NKX2-2O95096 273 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 RPLP0P05388 317 aaKnown RBP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 STARD6P59095 220 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 EFNB1P98172 346 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 RHAGQ02094 409 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 ZNF846Q147U1 533 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 EXOSC7Q15024 291 aaKnown RBP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 C11orf91Q3C1V1 193 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 CCNJQ5T5M9 372 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 ACSM5Q6NUN0 579 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 C17orf82Q86X59 251 aaPredicted RBP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 KIF18BQ86Y91 864 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 SDR16C5Q8N3Y7 309 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 MAFAQ8NHW3 353 aaPredicted RBP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 WDR36Q8NI36 951 aaKnown RBP15.54■□□□□ 0.08
SAMM50-201ENST00000350028 DOK4Q8TEW6 326 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 ZHX1-C8orf76Q96EF9 292 aa15.54■□□□□ 0.08
SAMM50-201ENST00000350028 SH3YL1Q96HL8 342 aaPredicted RBP15.54■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms