RNA–Protein interactions for RNA: ENST00000347617.10

HMGA1-202, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA1, Length 1,773 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-202ENST00000347617 FAM227AF5H4B4 570 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 GABRPO00591 440 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 MTRF1O75570 445 aaKnown RBP14.91□□□□□ -0.02
HMGA1-202ENST00000347617 MESP2Q0VG99 397 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 COL19A1Q14993 1142 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 GARNL3Q5VVW2 1013 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 SLCO4C1Q6ZQN7 724 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 PARS2Q7L3T8 475 aaKnown RBP14.91□□□□□ -0.02
HMGA1-202ENST00000347617 ZNF655Q8N720 491 aaPredicted RBP14.91□□□□□ -0.02
HMGA1-202ENST00000347617 POGLUT1Q8NBL1 392 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 GPR32P1Q8NGA4 272 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 GATAD2BQ8WXI9 593 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 SUSD6Q92537 303 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 UBE2E3Q969T4 207 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 NXPE2Q96DL1 559 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 TM9SF2Q99805 663 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 THAP7Q9BT49 309 aaPredicted RBP14.91□□□□□ -0.02
HMGA1-202ENST00000347617 TRMT61BQ9BVS5 477 aaKnown RBP14.91□□□□□ -0.02
HMGA1-202ENST00000347617 HDAC8Q9BY41 377 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 PRM3Q9NNZ6 103 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 MED9Q9NWA0 146 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 RABL2AQ9UBK7 228 aaPredicted RBP14.91□□□□□ -0.02
HMGA1-202ENST00000347617 MALT1Q9UDY8 824 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 SCP2D1Q9UJQ7 156 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 ZNF222Q9UK12 451 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 ACSL6Q9UKU0 697 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 RABL2BQ9UNT1 228 aa14.91□□□□□ -0.02
HMGA1-202ENST00000347617 YARS2Q9Y2Z4 477 aaKnown RBP14.91□□□□□ -0.02
HMGA1-202ENST00000347617 MEIKINA0A087WXM9 373 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 ARHGEF33A8MVX0 844 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 TRIM77I1YAP6 450 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 KPNA3O00505 521 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-202ENST00000347617 MMP20O60882 483 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 ITGA10O75578 1167 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 KAT7O95251 611 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 IFNA16P05015 189 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 LIMS3P0CW19 117 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 LIMS4P0CW20 117 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 CD53P19397 219 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 AHCYP23526 432 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 ACSL1P33121 698 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 TNFRSF4P43489 277 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 AGFG1P52594 562 aaKnown RBP14.9□□□□□ -0.02
HMGA1-202ENST00000347617 POU6F2P78424 691 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-202ENST00000347617 SF1Q15637 639 aaKnown RBP14.9□□□□□ -0.02
HMGA1-202ENST00000347617 TMEM52BQ4KMG9 183 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 NDUFAF5Q5TEU4 345 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 HBMQ6B0K9 141 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 PYHIN1Q6K0P9 492 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 SERPINA13PQ6UXR4 307 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 Q6ZVL8 140 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 PLEKHM3Q6ZWE6 761 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 FBXO15Q8NCQ5 510 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-202ENST00000347617 TEX47Q8TBZ9 253 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 ADAMTS14Q8WXS8 1223 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 COQ10AQ96MF6 247 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 SPATA5L1Q9BVQ7 753 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 ABCG5Q9H222 651 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 MTG2Q9H4K7 406 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 EPHX3Q9H6B9 360 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 NEUROD4Q9HD90 331 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 MED17Q9NVC6 651 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 FBXW2Q9UKT8 454 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 LIPT1Q9Y234 373 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 C1QTNF3-AMACRE9PGA6 284 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 PLXNA2O75051 1894 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 APODP05090 189 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 IGFBP1P08833 259 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-202ENST00000347617 ELFN1P0C7U0 828 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 UGT2B7P16662 529 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 SLC1A3P43003 542 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 GBX2P52951 348 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-202ENST00000347617 CSTF1Q05048 431 aaKnown RBP14.9□□□□□ -0.02
HMGA1-202ENST00000347617 TRAM1Q15629 374 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 NTRK2Q16620 822 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 MPEG1Q2M385 716 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 PXDC1Q5TGL8 231 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 OR2G6Q5TZ20 316 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 FAM46CQ5VWP2 391 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 BAIAP2L2Q6UXY1 529 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 DEF8Q6ZN54 512 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 RTL4Q6ZR62 310 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 RFLNAQ6ZTI6 216 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 C16orf62Q7Z3J2 963 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 GJD3Q8N144 294 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 SLC7A13Q8TCU3 470 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 SLC38A5Q8WUX1 472 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 CIDECQ96AQ7 238 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-202ENST00000347617 MSANTD3Q96H12 275 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 TMEM19Q96HH6 336 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 SENP5Q96HI0 755 aaPredicted RBP14.9□□□□□ -0.02
HMGA1-202ENST00000347617 OR4K3Q96R72 315 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 FNDC11Q9BVV2 318 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 RNF32Q9H0A6 362 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 DMRT3Q9NQL9 472 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 ENAMQ9NRM1 1142 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 ZNF224Q9NZL3 707 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 EXOGQ9Y2C4 368 aaKnown RBP14.9□□□□□ -0.02
HMGA1-202ENST00000347617 DYRK1BQ9Y463 629 aa14.9□□□□□ -0.02
HMGA1-202ENST00000347617 SESN1Q9Y6P5 492 aa14.9□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms