RNA–Protein interactions for RNA: ENST00000347519.10

CHMP4A-201, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 1 (best) BASIC

Gene CHMP4A, Length 1,393 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-201ENST00000347519 FLRT3Q9NZU0 649 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 MYOTQ9UBF9 498 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 LIPT1Q9Y234 373 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 C5orf58C9J3I9 102 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 ERFP50548 548 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 CYP27C1Q4G0S4 372 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 CRTC2Q53ET0 693 aaPredicted RBP17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 UNQ6494/PRO21346Q6UXR6 183 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 LRRC74BQ6ZQY2 392 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 EFHD2Q96C19 240 aaPredicted RBP17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 OMA1Q96E52 524 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 HSPBAP1Q96EW2 488 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 FER1L6-AS2Q96M78 137 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 ZNF350Q9GZX5 532 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 QRSL1Q9H0R6 528 aaKnown RBP17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 BCL2L10Q9HD36 194 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 ATP13A2Q9NQ11 1180 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 MKLN1Q9UL63 735 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 RAXQ9Y2V3 346 aa17.53■□□□□ 0.4
CHMP4A-201ENST00000347519 CENPVL1A0A0U1RR11 272 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 TMEM8BA6NDV4 472 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 TMEM229AB2RXF0 380 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 TAF4O00268 1085 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 TSPAN2O60636 221 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 DNAJB5O75953 348 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 OR2J2O76002 312 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 ABCD3P28288 659 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 KDELR2P33947 212 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 MLF1P58340 268 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 TRAP1Q12931 704 aaKnown RBP17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 AIMP2Q13155 320 aaKnown RBP17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 DEFB109BQ30KR1 87 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 CCDC80Q76M96 950 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 RPS19BP1Q86WX3 136 aaKnown RBP17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 SPPL2CQ8IUH8 684 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 SLC34A3Q8N130 599 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 TNIP2Q8NFZ5 429 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 TAMM41Q96BW9 452 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 RASL10BQ96S79 203 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 ACTR3BQ9P1U1 418 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 KCNE5Q9UJ90 142 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 POLHQ9Y253 713 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 ANGPT4Q9Y264 503 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 WDR45Q9Y484 360 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 PCDHGB3Q9Y5G1 929 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 DSPPQ9NZW4 1301 aa17.52■□□□□ 0.39
CHMP4A-201ENST00000347519 CPAMD8Q8IZJ3 1885 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 M0QX08 132 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 ACOX3O15254 700 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 ITGA10O75578 1167 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 IL33O95760 270 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 AK1P00568 194 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 OPN1SWP03999 348 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 ITPKBP27987 946 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 CRISP3P54108 245 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 POLE2P56282 527 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 PLCXD2Q0VAA5 305 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 CCNIQ14094 377 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 MAPK14Q16539 360 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 LCN8Q6JVE9 175 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 DHFR2Q86XF0 187 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 ARMC10Q8N2F6 343 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 METTL25Q8N6Q8 603 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 BBS10Q8TAM1 723 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 SAP130Q9H0E3 1048 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 DENND2DQ9H6A0 471 aaPredicted RBP17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 GORASP2Q9H8Y8 452 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 MAGEL2Q9UJ55 1249 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 NPFFR2Q9Y5X5 522 aa17.51■□□□□ 0.39
CHMP4A-201ENST00000347519 A0A0G2JPF8 293 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 TCRBV5S2A0A599 114 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 TMEM247A6NEH6 219 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 HNRNPCL2B2RXH8 293 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 HNRNPCL3B7ZW38 293 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 KIAA0513O60268 411 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 STX11O75558 287 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 REM1O75628 298 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 CIB2O75838 187 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 SOX30O94993 753 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 HNRNPCL4P0DMR1 293 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 ITGA3P26006 1051 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 RNF144AP50876 292 aaPredicted RBP17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 TLE3Q04726 772 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 KPNB1Q14974 876 aaKnown RBP17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 GPR68Q15743 365 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 DECR1Q16698 335 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 CPEB4Q17RY0 729 aaKnown RBP eCLIP17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 LRRC23Q53EV4 343 aaPredicted RBP17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 C1orf146Q5VVC0 180 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 PRAMEF8Q5VWM4 474 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 PRAMEF7Q5VXH5 474 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 PROSER1Q86XN7 944 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 SLC30A8Q8IWU4 369 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 TMEM102Q8N9M5 508 aaPredicted RBP17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 BHLHE22Q8NFJ8 381 aaPredicted RBP17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 OR10Q1Q8NGQ4 319 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 FAM162AQ96A26 154 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 COL21A1Q96P44 957 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 ADOQ96SZ5 270 aa17.5■□□□□ 0.39
CHMP4A-201ENST00000347519 LHPPQ9H008 270 aa17.5■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms