RNA–Protein interactions for RNA: ENST00000346569.6

ECM1-201, Transcript of extracellular matrix protein 1, humanhuman

TSL 1 (best) BASIC

Gene ECM1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECM1-201ENST00000346569 VRK2Q86Y07 508 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 HIPK1Q86Z02 1210 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 LACC1Q8IV20 430 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 HS3ST5Q8IZT8 346 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 COX18Q8N8Q8 333 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 MORN4Q8NDC4 146 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 NFAM1Q8NET5 270 aaPredicted RBP10.18□□□□□ -0.78
ECM1-201ENST00000346569 OR4N2Q8NGD1 307 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 OR52P1PQ8NH57 321 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 OR14A16Q8NHC5 309 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 SLC2A12Q8TD20 617 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 PROX1Q92786 737 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 DAZLQ92904 295 aaKnown RBP10.18□□□□□ -0.78
ECM1-201ENST00000346569 ADIPOR1Q96A54 375 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 ZNF570Q96NI8 536 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 NUDT9Q9BW91 350 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 OSBPL10Q9BXB5 764 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 STRADBQ9C0K7 418 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 VCXQ9H320 206 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 ACER3Q9NUN7 267 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 USE1Q9NZ43 259 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 ACAD8Q9UKU7 415 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 RAB26Q9ULW5 256 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 PPIEQ9UNP9 301 aaKnown RBP10.18□□□□□ -0.78
ECM1-201ENST00000346569 LOXL2Q9Y4K0 774 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 B3GALT1Q9Y5Z6 326 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 CCDC88CQ9P219 2028 aa10.18□□□□□ -0.78
ECM1-201ENST00000346569 A0A1W2PNU3 283 aaPredicted RBP10.17□□□□□ -0.78
ECM1-201ENST00000346569 AGAP5A6NIR3 686 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 NPIPB9F8W1W9 429 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 J3KTA2 159 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 EI24O14681 340 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 DYRK3O43781 588 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 KIAA0513O60268 411 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ALOX12BO75342 701 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 IFNW1P05000 195 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ALPLP05186 524 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 KLK3P07288 261 aaPredicted RBP10.17□□□□□ -0.78
ECM1-201ENST00000346569 HEXBP07686 556 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 THBS1P07996 1170 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 CDK4P11802 303 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 FUT4P22083 530 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 PRKACGP22612 351 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 PIGAP37287 484 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 LIMS1P48059 325 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ALDH3A2P51648 485 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 CLDN6P56747 220 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 RAB15P59190 212 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 PPP2R2BQ00005 443 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ZNF155Q12901 538 aaPredicted RBP10.17□□□□□ -0.78
ECM1-201ENST00000346569 DAG1Q14118 895 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 KIF26BQ2KJY2 2108 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 DCAF12Q5T6F0 453 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ANKRD34AQ69YU3 496 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 FAM199XQ6PEV8 388 aaPredicted RBP10.17□□□□□ -0.78
ECM1-201ENST00000346569 FIGNL1Q6PIW4 674 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 RAB11FIP2Q7L804 512 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ANKRD37Q7Z713 158 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 RBM45Q8IUH3 476 aaKnown RBP10.17□□□□□ -0.78
ECM1-201ENST00000346569 ZNF619Q8N2I2 560 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 CLIP4Q8N3C7 705 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 OR4C15Q8NGM1 316 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 OR1N1Q8NGS0 311 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ART5Q96L15 291 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 DHRS1Q96LJ7 313 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 TAAR9Q96RI9 348 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 EPYCQ99645 322 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 BARD1Q99728 777 aaKnown RBP10.17□□□□□ -0.78
ECM1-201ENST00000346569 PIP5K1AQ99755 562 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ARHGDIGQ99819 225 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ZPBPQ9BS86 351 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ITPAQ9BY32 194 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 SEMA4CQ9C0C4 833 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 SOX17Q9H6I2 414 aaPredicted RBP10.17□□□□□ -0.78
ECM1-201ENST00000346569 WDR54Q9H977 334 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 KCND3Q9UK17 655 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ZNF232Q9UNY5 417 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 CFL2Q9Y281 166 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 LYVE1Q9Y5Y7 322 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 SPEGQ15772 3267 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 NUP210LQ5VU65 1888 aa10.17□□□□□ -0.78
ECM1-201ENST00000346569 ADAMDEC1O15204 470 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 TPST2O60704 377 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 CSO75390 466 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 UGT2B17O75795 530 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 KLF7O75840 302 aaPredicted RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 HPRP00739 348 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 DRD5P21918 477 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 RRM2P31350 389 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 YAP1P46937 504 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 HSPA13P48723 471 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 DAPP51397 102 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 DCAF7P61962 342 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 EEF1A1P68104 462 aaKnown RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 GK3PQ14409 553 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 GPR68Q15743 365 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 NPTX1Q15818 432 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 CCDC157Q569K6 752 aa10.16□□□□□ -0.78
ECM1-201ENST00000346569 OTUD3Q5T2D3 398 aaPredicted RBP10.16□□□□□ -0.78
ECM1-201ENST00000346569 FAM198BQ6UWH4 519 aa10.16□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms