RNA–Protein interactions for RNA: ENST00000344626.8

SMARCA4-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 1 (best) BASIC

Gene SMARCA4, Length 5,392 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-201ENST00000344626 TMEM80Q96HE8 168 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 QSER1Q2KHR3 1735 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 H3BML4 177 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 CASC3O15234 703 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 BCKDHBP21953 392 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 ETV4P43268 484 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 TSFMP43897 325 aaKnown RBP15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 PSPHP78330 225 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 DCST2Q5T1A1 773 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 TREML1Q86YW5 311 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 SLC45A3Q96JT2 553 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 AMBNQ9NP70 447 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 ANKRD10Q9NXR5 420 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 MT-CO3P00414 261 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 GGT1P19440 569 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 CSNK2A1P68400 391 aaPredicted RBP15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 POU4F2Q12837 409 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 SLITRK4Q8IW52 837 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 TCEANCQ8N8B7 351 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 BTBD2Q9BX70 525 aa15.44■□□□□ 0.06
SMARCA4-201ENST00000344626 G3V3Y1 287 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 OR2T1O43869 369 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 PIAS2O75928 621 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 H2BFMP0C1H6 154 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 ZP2Q05996 745 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 HMBOX1Q6NT76 420 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 SLCO4C1Q6ZQN7 724 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 GALNT6Q8NCL4 622 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 C1orf216Q8TAB5 229 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 KCNE4Q8WWG9 221 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 SLC6A16Q9GZN6 736 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 SPHK1Q9NYA1 384 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 PCDHA9Q9Y5H5 950 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 TARM1B6A8C7 271 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 SSNA1O43805 119 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 FMO6PO60774 539 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 ACTC1P68032 377 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 ACTA1P68133 377 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 OR5M10Q6IEU7 315 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 BPHLQ86WA6 291 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 SLC41A3Q96GZ6 507 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 C19orf43Q9BQ61 176 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 PDGFBP01127 241 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 HMGN2P05204 90 aaKnown RBP15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 TPOP07202 933 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 EPHA4P54764 986 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 PITPNAQ00169 270 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 PSD4Q8NDX1 1056 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 NSMAFQ92636 917 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 TESCQ96BS2 214 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 TM9SF2Q99805 663 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 CCM2LQ9NUG4 571 aaPredicted RBP15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 CCDC187A0A096LP49 1063 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 DCDC2BA2VCK2 349 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 GABRR3A8MPY1 467 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 HSD17B1P14061 328 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 GSTT1P30711 240 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 GALK2Q01415 458 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 CCDC80Q76M96 950 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 NAGSQ8N159 534 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 POC5Q8NA72 575 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 THAP4Q8WY91 577 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 PEX16Q9Y5Y5 336 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 WDR90Q96KV7 1748 aa15.43■□□□□ 0.06
SMARCA4-201ENST00000344626 A0A1B0GX78 115 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 PATE3B3GLJ2 98 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 PRKCAP17252 672 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 S1PR1P21453 382 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 PRKACGP22612 351 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 PSMD7P51665 324 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 MALLQ13021 153 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 GK3PQ14409 553 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 USP43Q70EL4 1123 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 ABHD12BQ7Z5M8 362 aaPredicted RBP15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 NKD1Q969G9 470 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 VEZF1Q14119 521 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 GPNMBQ14956 572 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 LIMS2Q7Z4I7 341 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 KCTD7Q96MP8 289 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 SEMA4GQ9NTN9 838 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 SPAARA0A1B0GVQ0 90 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 HPRP00739 348 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 SMCO1Q147U7 214 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 RGS21Q2M5E4 152 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 LIX1LQ8IVB5 337 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 L3MBTL4Q8NA19 623 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 PMM1Q92871 262 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 BIRC8Q96P09 236 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 INPP5KQ9BT40 448 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 SPTAN1Q13813 2472 aaKnown RBP15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 A0A075B6Q4 140 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 A0A1W2PRQ8 180 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 SLC5A10A0PJK1 596 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 OLFM2O95897 454 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 HLA-DPB1P04440 258 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 HCKP08631 526 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 PCGF2P35227 344 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 GCGRP47871 477 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 VBP1P61758 197 aa15.42■□□□□ 0.06
SMARCA4-201ENST00000344626 SFT2D3Q587I9 215 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms