RNA–Protein interactions for RNA: ENST00000344113.8

SYNE2-202, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE2, Length 21,777 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-202ENST00000344113 MAST1Q9Y2H9 1570 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TNCP24821 2201 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 DVL1O14640 695 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MMP15P51511 669 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 DVL1P1P54792 670 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 UBE2KP61086 200 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 IFITM2Q01629 132 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PDZK1IP1Q13113 114 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 DHCR24Q15392 516 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 QRICH1Q2TAL8 776 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 C1orf186Q6ZWK4 172 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GABRG1Q8N1C3 465 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 HORMAD2Q8N7B1 307 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PNPLA2Q96AD5 504 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF300Q96RE9 604 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PIMREGQ9BSJ6 248 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CACNG6Q9BXT2 260 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GDF2Q9UK05 429 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 E7EQ34 232 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CETPP11597 493 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ERVFRD-1P60508 538 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MAP2K5Q13163 448 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 NFATC2Q13469 925 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 INPP5JQ15735 1006 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF468Q5VIY5 522 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CCDC190Q86UF4 302 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OR10K1Q8NGX5 313 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MAP3K3Q99759 626 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CHST11Q9NPF2 352 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MIOXQ9UGB7 285 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 HIST1H1BP16401 226 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 HTR1EP28566 365 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 S100A11P31949 105 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 HEPHL1Q6MZM0 1159 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TMEM107Q6UX40 140 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 KMT5CQ86Y97 462 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SERPINA12Q8IW75 414 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 LRRC3BQ96PB8 259 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MRPL4Q9BYD3 311 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 LRRC4CQ9HCJ2 640 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GLRX2Q9NS18 164 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CDC14AQ9UNH5 594 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TNFSF12-TNFSF13A0A0A6YY99 330 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 WASHC1A8K0Z3 465 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PLCXD3Q63HM9 321 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 WASH2PQ6VEQ5 465 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OR51T1Q8NGJ9 327 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 FEZF2Q8TBJ5 459 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF596Q8TC21 504 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SFXN2Q96NB2 322 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OR52E6Q96RD3 313 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TUBD1Q9UJT1 453 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 YDJCA8MPS7 323 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 UMAD1C9J7I0 102 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PRSS23O95084 383 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ITGB2P05107 769 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TLX1P31314 330 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CCR7P32248 378 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PPP1R8Q12972 351 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MTAPQ13126 283 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 MTM1Q13496 603 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CTF1Q16619 201 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 C12orf54Q6X4T0 127 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SERPINA9Q86WD7 417 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 XYLT1Q86Y38 959 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF321PQ8N8H1 164 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TRMT10AQ8TBZ6 339 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 C16orf78Q8WTQ4 265 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 RGP1Q92546 391 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 HAS2Q92819 552 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 FAM131CQ96AQ9 280 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 RBM18Q96H35 190 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ENKD1Q9H0I2 346 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SLC6A20Q9NP91 592 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GABRR3A8MPY1 467 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 KDM4EB2RXH2 506 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PIPP12273 146 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 AHCYP23526 432 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PNPLA4P41247 253 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SRSF4Q08170 494 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TAF13Q15543 124 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 NPSR1Q6W5P4 371 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 RTL10Q7L3V2 364 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TMPRSS7Q7RTY8 843 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ZGRF1Q86YA3 2104 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 IRF2BP1Q8IU81 584 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 PRR22Q8IZ63 422 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SLC35C1Q96A29 364 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SGIP1Q9BQI5 828 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF552Q9H707 407 aaPredicted RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF407Q9C0G0 2248 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 CLDN4O14493 209 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 GOT2P00505 430 aaKnown RBP3.58□□□□□ -1.84
SYNE2-202ENST00000344113 TYRP1P17643 537 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SEC13P55735 322 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ZNF546Q86UE3 836 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SLC35B2Q8TB61 432 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 SLC46A1Q96NT5 459 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 OR7D2Q96RA2 312 aa3.58□□□□□ -1.84
SYNE2-202ENST00000344113 ENAMQ9NRM1 1142 aa3.58□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms