RNA–Protein interactions for RNA: ENST00000343975.9

HMGCR-202, Transcript of 3-hydroxy-3-methylglutaryl-CoA reductase, humanhuman

TSL 1 (best) BASIC

Gene HMGCR, Length 3,681 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCR-202ENST00000343975 C1orf21Q9H246 121 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 CNIH4Q9P003 139 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 FAM220BPB1ANY3 271 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 C1QTNF9BB2RNN3 333 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 CXCR6O00574 342 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 CDK2AP1O14519 115 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 HCRTR2O43614 444 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 PPM1BO75688 479 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 SLC25A12O75746 678 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 TRAPPC6AO75865 159 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 PDE5AO76074 875 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 CBX7O95931 251 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 C1QTNF9P0C862 333 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 GTF2E2P29084 291 aaKnown RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 CDKN2CP42773 168 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 SLC37A1P57057 533 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 IL10RAQ13651 578 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 DUSP5Q16690 384 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.55□□□□□ -1.22e-6■□□□□ 9.8
HMGCR-202ENST00000343975 SERPINA11Q86U17 422 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 EID3Q8N140 333 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 KIF2BQ8N4N8 673 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 ARHGEF39Q8N4T4 335 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 C17orf47Q8NEP4 570 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 PIK3R3Q92569 461 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 ZNF597Q96LX8 424 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 LMF1Q96S06 567 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 LDAHQ9H6V9 325 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 LIN28AQ9H9Z2 209 aaKnown RBP7.55□□□□□ -1.2
HMGCR-202ENST00000343975 KLHL1Q9NR64 748 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 SERINC1Q9NRX5 453 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 MKLN1Q9UL63 735 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 SLC35A3Q9Y2D2 325 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 V9GYQ6 96 aa7.55□□□□□ -1.2
HMGCR-202ENST00000343975 M0QX08 132 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 DDAH2O95865 285 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 CT62P0C5K7 136 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 ITGAMP11215 1152 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 RYKP34925 604 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 ATP12AP54707 1039 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 WNT3P56703 355 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 SMIM11AP58511 58 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 GAB1Q13480 694 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 ELOAQ14241 798 aaKnown RBP7.54□□□□□ -1.2
HMGCR-202ENST00000343975 CPZQ66K79 652 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 WDR53Q7Z5U6 358 aaPredicted RBP7.54□□□□□ -1.2
HMGCR-202ENST00000343975 TOR1AIP2Q8NFQ8 470 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 CPPED1Q9BRF8 314 aaPredicted RBP7.54□□□□□ -1.2
HMGCR-202ENST00000343975 ZNF385DQ9H6B1 395 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 EVA1AQ9H8M9 152 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 EGFL7Q9UHF1 273 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 TMCC3Q9ULS5 477 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 SPIN1Q9Y657 262 aaPredicted RBP7.54□□□□□ -1.2
HMGCR-202ENST00000343975 OR5H15A6NDH6 313 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 PRAMEF25A6NGN4 478 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 SOCS6O14544 535 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 NKX2-2O95096 273 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 LINGO3P0C6S8 592 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 ARAFP10398 606 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 MFAP5Q13361 173 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 SNTA1Q13424 505 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 ATP1A1-AS1Q5TC04 95 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 PRAMEF8Q5VWM4 474 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 PRAMEF7Q5VXH5 474 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 PPP4R4Q6NUP7 873 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 RETREG3Q86VR2 466 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 SLC15A3Q8IY34 581 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 OR52P1PQ8NH57 321 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 ZNF721Q8TF20 911 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 IMMP1LQ96LU5 166 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 OSBPL11Q9BXB4 747 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 SPRY4Q9C004 299 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 ANKRA2Q9H9E1 313 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 CPNE5Q9HCH3 593 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 TAS2R1Q9NYW7 299 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 GPR55Q9Y2T6 319 aaPredicted RBP7.54□□□□□ -1.2
HMGCR-202ENST00000343975 CNOT3O75175 753 aaKnown RBP7.54□□□□□ -1.2
HMGCR-202ENST00000343975 H6PDO95479 791 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 GPX2P18283 190 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 PGCP20142 388 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 DCTP40126 519 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 FRKP42685 505 aaPredicted RBP7.54□□□□□ -1.2
HMGCR-202ENST00000343975 HLCSP50747 726 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 CORO7P57737 925 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 TLE3Q04726 772 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 VEZF1Q14119 521 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 CEBPEQ15744 281 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 YTHDF3Q7Z739 585 aaKnown RBP7.54□□□□□ -1.2
HMGCR-202ENST00000343975 GALNT10Q86SR1 603 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 CDK20Q8IZL9 346 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 BEST3Q8N1M1 668 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 PSMA8Q8TAA3 256 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 VCXQ9H320 206 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 AGPAT4Q9NRZ5 378 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 ANKRD10Q9NXR5 420 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 SH3GLB1Q9Y371 365 aa7.54□□□□□ -1.2
HMGCR-202ENST00000343975 K7ENP7 123 aa7.53□□□□□ -1.2
HMGCR-202ENST00000343975 TFECO14948 347 aaPredicted RBP7.53□□□□□ -1.2
HMGCR-202ENST00000343975 SNX4O95219 450 aa7.53□□□□□ -1.2
HMGCR-202ENST00000343975 PGM3O95394 542 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms