RNA–Protein interactions for RNA: ENST00000343575.10

CXCL12-201, Transcript of C-X-C motif chemokine ligand 12, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CXCL12, Length 1,857 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL12-201ENST00000343575 FAM149AA5PLN7 773 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 OR10H2O60403 315 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 FTH1P19P0C7X4 201 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 MAP3K8P41279 467 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 NHLH1Q02575 133 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 NKG7Q16617 165 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 NDUFA5Q16718 116 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 MFSD12Q6NUT3 480 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 MRPL14Q6P1L8 145 aaKnown RBP13.67□□□□□ -0.22
CXCL12-201ENST00000343575 GALNT12Q8IXK2 581 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 VWA5B2Q8N398 1253 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 TMCO5AQ8N6Q1 288 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 AMER2Q8N7J2 671 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 SLC16A11Q8NCK7 471 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 C11orf65Q8NCR3 313 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 PLPP5Q8NEB5 264 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 NFKBIDQ8NI38 313 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 FBXO30Q8TB52 745 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 RIT1Q92963 219 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 NSMCE2Q96MF7 247 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 SPSB2Q99619 263 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 STRADBQ9C0K7 418 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 EQTNQ9NQ60 294 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 DCAF13Q9NV06 445 aaKnown RBP13.67□□□□□ -0.22
CXCL12-201ENST00000343575 DAPK2Q9UIK4 370 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 MKL2Q9ULH7 1088 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 CEP250Q9BV73 2442 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 GSTA4O15217 222 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 SLITRK5O94991 958 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 PRSS23O95084 383 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 CLPSP04118 112 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 SSTR4P31391 388 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 KDELR2P33947 212 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 GALNSP34059 522 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 SERPINB10P48595 397 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 MAPK10P53779 464 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 PCBP3P57721 371 aaKnown RBP13.67□□□□□ -0.22
CXCL12-201ENST00000343575 CDK6Q00534 326 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 RBBP4Q09028 425 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 DAG1Q14118 895 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 SERTAD2Q14140 314 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 AGAP7PQ5VUJ5 663 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 OLIG3Q7RTU3 272 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 OFCC1Q8IZS5 231 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 C8orf59Q8N0T1 100 aaPredicted RBP13.67□□□□□ -0.22
CXCL12-201ENST00000343575 SLC35A4Q96G79 324 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 SH3YL1Q96HL8 342 aaPredicted RBP13.67□□□□□ -0.22
CXCL12-201ENST00000343575 MS4A4EQ96PG1 132 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 ULBP3Q9BZM4 244 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 NAA50Q9GZZ1 169 aaKnown RBP13.67□□□□□ -0.22
CXCL12-201ENST00000343575 SLC26A1Q9H2B4 701 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 A4GALTQ9NPC4 353 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 PISDQ9UG56 409 aa13.67□□□□□ -0.22
CXCL12-201ENST00000343575 C9orf172C9J069 976 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 TMX2-CTNND1H3BSU7 103 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 J3QRK9 145 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 PLD2O14939 933 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 TPST1O60507 370 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 THRBP10828 461 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 PRIM2P49643 509 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 EMDP50402 254 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 FUT7Q11130 342 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 SCARB2Q14108 478 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 MFSD4BQ5TF39 518 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 FAM69BQ5VUD6 431 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 BHLHB9Q6PI77 547 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 FAM198BQ6UWH4 519 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 ENPP6Q6UWR7 440 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 LANCL3Q6ZV70 420 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 MARCH9Q86YJ5 346 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 ANKRD13BQ86YJ7 626 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 LGI4Q8N135 537 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 OR10Q1Q8NGQ4 319 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 XAGE5Q8WWM1 108 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 HOXB13Q92826 284 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-201ENST00000343575 SDCCAG3Q96C92 435 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 DGAT2Q96PD7 388 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 DEPDC7Q96QD5 511 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 ALPK1Q96QP1 1244 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 OR7D2Q96RA2 312 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 SOX17Q9H6I2 414 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-201ENST00000343575 RUBCNLQ9H714 662 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 ADAP2Q9NPF8 381 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 AKAP7Q9P0M2 348 aaPredicted RBP13.66□□□□□ -0.22
CXCL12-201ENST00000343575 CORINQ9Y5Q5 1042 aa13.66□□□□□ -0.22
CXCL12-201ENST00000343575 SNAP29O95721 258 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 SERPINA1P01009 418 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 ACP2P11117 423 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 CSRP1P21291 193 aaKnown RBP13.65□□□□□ -0.22
CXCL12-201ENST00000343575 CRHBPP24387 322 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 AQP1P29972 269 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 ZNF267Q14586 743 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-201ENST00000343575 NSDHLQ15738 373 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 SYPL1Q16563 259 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 ZNF630Q2M218 657 aaPredicted RBP13.65□□□□□ -0.22
CXCL12-201ENST00000343575 DCAF12Q5T6F0 453 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 XAF1Q6GPH4 301 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 ZNF321PQ8N8H1 164 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 OR52R1Q8NGF1 315 aa13.65□□□□□ -0.22
CXCL12-201ENST00000343575 TAAR9Q96RI9 348 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms