RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 ABCA7Q8IZY2 2146 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 A0A087WV62 115 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 CLDN24A6NM45 220 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 ZAR1LA6NP61 321 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 PLOD3O60568 738 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 SOX14O95416 240 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 NADKO95544 446 aaPredicted RBP17.35■□□□□ 0.37
HOXA9-201ENST00000343483 STSP08842 583 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 CT62P0C5K7 136 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 SKP1P63208 163 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 SLC13A2Q13183 592 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 SYT16Q17RD7 645 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 ARHGAP11BQ3KRB8 267 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 PGBD2Q6P3X8 592 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 OGFOD3Q6PK18 319 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 ADCK1Q86TW2 530 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 TMCO5AQ8N6Q1 288 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 PEX11GQ96HA9 241 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 FUZQ9BT04 418 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 LRFN3Q9BTN0 628 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 MAN2C1Q9NTJ4 1040 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 LRIT1Q9P2V4 623 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 RNF215Q9Y6U7 377 aa17.35■□□□□ 0.37
HOXA9-201ENST00000343483 TLCD2A6NGC4 264 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 FOXS1O43638 330 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 ALOX5P09917 674 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 ATXN8OSP0DMR3 200 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 PRKAR1BP31321 381 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 LIPAP38571 399 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 SERPINB10P48595 397 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 TAS2R41P59536 307 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 MAT1AQ00266 395 aaKnown RBP17.34■□□□□ 0.37
HOXA9-201ENST00000343483 TIGD6Q17RP2 521 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 TYW3Q6IPR3 259 aaKnown RBP17.34■□□□□ 0.37
HOXA9-201ENST00000343483 CLIP4Q8N3C7 705 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 SDR16C5Q8N3Y7 309 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 DYNC2LI1Q8TCX1 351 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 DNASE2BQ8WZ79 361 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 PIK3R3Q92569 461 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 LGALS12Q96DT0 336 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 ARHGDIGQ99819 225 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 PIGUQ9H490 435 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 MTHFD2LQ9H903 347 aaPredicted RBP17.34■□□□□ 0.37
HOXA9-201ENST00000343483 CAPN10Q9HC96 672 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 KLHL28Q9NXS3 571 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 PLCL2Q9UPR0 1127 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 CHST2Q9Y4C5 530 aa17.34■□□□□ 0.37
HOXA9-201ENST00000343483 HYKKA2RU49 373 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 CLDN25C9JDP6 229 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 M0R082 166 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 SLITRK5O94991 958 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 RNH1P13489 461 aaKnown RBP17.33■□□□□ 0.37
HOXA9-201ENST00000343483 OSMP13725 252 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 ZNF12P17014 697 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 CNR2P34972 360 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 HOXC5Q00444 222 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 MGAT2Q10469 447 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 ST3GAL4Q11206 333 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 ZNF846Q147U1 533 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 GPR68Q15743 365 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 WDR45BQ5MNZ6 344 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 PTCHD4Q6ZW05 846 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 PEX5LQ8IYB4 626 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 METTL27Q8N6F8 245 aaPredicted RBP17.33■□□□□ 0.37
HOXA9-201ENST00000343483 COX18Q8N8Q8 333 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 CDRT4Q8N9R6 151 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 OR4K5Q8NGD3 323 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 ZNF675Q8TD23 568 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 GPR151Q8TDV0 419 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 VMP1Q96GC9 406 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 AHCYL2Q96HN2 611 aaKnown RBP17.33■□□□□ 0.37
HOXA9-201ENST00000343483 SDF2Q99470 211 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 POLR2J3Q9H1A7 115 aaKnown RBP17.33■□□□□ 0.37
HOXA9-201ENST00000343483 PDE7BQ9NP56 450 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 REV1Q9UBZ9 1251 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 ZNF443Q9Y2A4 671 aaPredicted RBP17.33■□□□□ 0.37
HOXA9-201ENST00000343483 NINQ8N4C6 2090 aa17.33■□□□□ 0.37
HOXA9-201ENST00000343483 SPAG17Q6Q759 2223 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 A0A1B0GVT2 93 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 CPSF4LA6NMK7 179 aaKnown RBP17.33■□□□□ 0.36
HOXA9-201ENST00000343483 EFCAB9A8MZ26 197 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 H3BN98 237 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 MPZL2O60487 215 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 SLC35E2P0CK97 266 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 INAVAQ3KP66 663 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 DCST2Q5T1A1 773 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 DGAT2L6Q6ZPD8 337 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 VWA5B2Q8N398 1253 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 B3GNT7Q8NFL0 401 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 ZDHHC12Q96GR4 267 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 ALOXE3Q9BYJ1 711 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 HMG20AQ9NP66 347 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 RHBDL2Q9NX52 303 aa17.33■□□□□ 0.36
HOXA9-201ENST00000343483 IGFBP1P08833 259 aaPredicted RBP17.32■□□□□ 0.36
HOXA9-201ENST00000343483 CCNYL3P0C7X3 344 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 IDUAP35475 653 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 RANBP1P43487 201 aa17.32■□□□□ 0.36
HOXA9-201ENST00000343483 RGS8P57771 180 aaPredicted RBP17.32■□□□□ 0.36
HOXA9-201ENST00000343483 LSM11P83369 360 aaKnown RBP eCLIP17.32■□□□□ 0.36
HOXA9-201ENST00000343483 STX4Q12846 297 aa17.32■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms