RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 DPM1O60762 260 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 NKX2-2O95096 273 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 AK1P00568 194 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 IGF2P01344 180 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 JUNP05412 331 aaKnown RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 KRT16P08779 473 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 STSP08842 583 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 NCF1P14598 390 aaPredicted RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 SAT1P21673 171 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 SDHAP31040 664 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 DLSTP36957 453 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 HPCAL1P37235 193 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 PEX19P40855 299 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 GZMMP51124 257 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 MVDP53602 400 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 GAS1P54826 345 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 MLF1P58340 268 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 RPS15P62841 145 aaKnown RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 NFATC3Q12968 1075 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 SLAMF1Q13291 335 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 MYBPC3Q14896 1274 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 ZNF630Q2M218 657 aaPredicted RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 TMEM44Q2T9K0 475 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 ZNF791Q3KP31 576 aaPredicted RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 GLYR1Q49A26 553 aaPredicted RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 ATP6AP1LQ52LC2 224 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 NDUFAF5Q5TEU4 345 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 ARHGAP40Q5TG30 622 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 FNDC7Q5VTL7 733 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 KLHL17Q6TDP4 642 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CALHM3Q86XJ0 350 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 SLC30A8Q8IWU4 369 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 C1orf52Q8N6N3 182 aaKnown RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CDYL2Q8N8U2 506 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 POGLUT1Q8NBL1 392 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 B3GNT7Q8NFL0 401 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 OR9A4Q8NGU2 314 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 LRRC8CQ8TDW0 803 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 APOBEC4Q8WW27 367 aaKnown RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 RAB24Q969Q5 203 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 MIEF2Q96C03 454 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 NEURL3Q96EH8 262 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 LRRC46Q96FV0 321 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CHMP6Q96FZ7 201 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 FAM46AQ96IP4 442 aaKnown RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 VSTM2LQ96N03 204 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 AMDHD1Q96NU7 426 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 KCNA7Q96RP8 456 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CSF3RQ99062 836 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 VRK1Q99986 396 aaPredicted RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CCDC106Q9BWC9 280 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 NMUR2Q9GZQ4 415 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 C12orf65Q9H3J6 166 aaKnown RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 RABEP2Q9H5N1 569 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CXorf21Q9HAI6 301 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 ATAD3AQ9NVI7 634 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 PNPOQ9NVS9 261 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 QPCTLQ9NXS2 382 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 MAT2BQ9NZL9 334 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CTSFQ9UBX1 484 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CFL2Q9Y281 166 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 DLGAP4Q9Y2H0 992 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 ATG4BQ9Y4P1 393 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 A0A096LPI6 279 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 A0A0A6YYC8 382 aaPredicted RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 IDSB3KWA1 339 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 I3L1I5 382 aaPredicted RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CLDN4O14493 209 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 AP3D1O14617 1153 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 FGF17O60258 216 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 COQ9O75208 318 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 RDH16O75452 317 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 ERAL1O75616 437 aaKnown RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 MYO1DO94832 1006 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 GLSO94925 669 aaPredicted RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 PGM3O95394 542 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CBX7O95931 251 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 MT-ND5P03915 603 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 ANXA2P07355 339 aaKnown RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CSF1P09603 554 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 C8orf89P0DMQ9 161 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 PAX1P15863 534 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 IL1RNP18510 177 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 TLX1P31314 330 aaPredicted RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 XCR1P46094 333 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 DIO3P55073 304 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 BTN3A2P78410 334 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 EEF1A2Q05639 463 aaKnown RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 RBBP5Q15291 538 aaKnown RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 NTRK2Q16620 822 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CYP27C1Q4G0S4 372 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 RFTN2Q52LD8 501 aaPredicted RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 SLC25A53Q5H9E4 307 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 NHSL2Q5HYW2 709 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 KHDC1LQ5JSQ8 128 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 SLC22A25Q6T423 547 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 CYP20A1Q6UW02 462 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 NUP54Q7Z3B4 507 aa3.22□□□□□ -1.89
CCDC66-202ENST00000341455 DMRTC2Q8IXT2 367 aaPredicted RBP3.22□□□□□ -1.89
CCDC66-202ENST00000341455 LRRC25Q8N386 305 aaPredicted RBP3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms