RNA–Protein interactions for RNA: ENST00000341290.6

PERM1-201, Transcript of PPARGC1 and ESRR induced regulator, muscle 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene PERM1, Length 3,035 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PERM1-201ENST00000341290 NDUFS4O43181 175 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 ALPPP05187 535 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 HMGN2P05204 90 aaKnown RBP14.32□□□□□ -0.12
PERM1-201ENST00000341290 ALAS2P22557 587 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 SMIM11AP58511 58 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 CSTF1Q05048 431 aaKnown RBP14.32□□□□□ -0.12
PERM1-201ENST00000341290 DUSP2Q05923 314 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 FUT5Q11128 374 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 ZNF267Q14586 743 aaPredicted RBP14.32□□□□□ -0.12
PERM1-201ENST00000341290 KLHL22Q53GT1 634 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 LILRA6Q6PI73 481 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 TMEM107Q6UX40 140 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 HSDL2Q6YN16 418 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 NEIL3Q8TAT5 605 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 TMEM163Q8TC26 289 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 DOK4Q8TEW6 326 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 NXPE3Q969Y0 559 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 ARRDC3Q96B67 414 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 BBS4Q96RK4 519 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 LGR4Q9BXB1 951 aa14.32□□□□□ -0.12
PERM1-201ENST00000341290 PRODHO43272 600 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 CDH11P55287 796 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 FAPQ12884 760 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 RRM2BQ7LG56 351 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 NUDT13Q86X67 352 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 FAM181AQ8N9Y4 354 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 DACT3Q96B18 629 aaPredicted RBP14.31□□□□□ -0.12
PERM1-201ENST00000341290 AMDHD1Q96NU7 426 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 ZCCHC2Q9C0B9 1178 aaKnown RBP14.31□□□□□ -0.12
PERM1-201ENST00000341290 OR52A5Q9H2C5 316 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 HIDE1A8MVS5 230 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 LYRM1O43325 122 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 PLOD3O60568 738 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 CA3P07451 260 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 ICAM2P13598 275 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 EVI2BP34910 448 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 NUDT1P36639 197 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 AP2S1P53680 142 aaPredicted RBP14.31□□□□□ -0.12
PERM1-201ENST00000341290 RNASE12Q5GAN4 147 aaKnown RBP14.31□□□□□ -0.12
PERM1-201ENST00000341290 C3orf38Q5JPI3 329 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 SLC36A4Q6YBV0 504 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 KCTD20Q7Z5Y7 419 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 KLBQ86Z14 1044 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 GHDCQ8N2G8 530 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 FBXO15Q8NCQ5 510 aaPredicted RBP14.31□□□□□ -0.12
PERM1-201ENST00000341290 PCNPQ8WW12 178 aaKnown RBP14.31□□□□□ -0.12
PERM1-201ENST00000341290 AP3S1Q92572 193 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 OSGEPL1Q9H4B0 414 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 TRIM45Q9H8W5 580 aaPredicted RBP14.31□□□□□ -0.12
PERM1-201ENST00000341290 HSPB11Q9Y547 144 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 SCN3AQ9NY46 2000 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 GRXCR1A8MXD5 290 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 SHOXO15266 292 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 CTNNB1P35222 781 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 SLC1A3P43003 542 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 COL19A1Q14993 1142 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 C1orf94Q6P1W5 598 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 ZNF793Q6ZN11 406 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 OR8K5Q8NH50 307 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 SPRYD4Q8WW59 207 aaPredicted RBP14.31□□□□□ -0.12
PERM1-201ENST00000341290 ATF6BQ99941 703 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 C1QTNF7Q9BXJ2 289 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 GON7Q9BXV9 100 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 HDHD2Q9H0R4 259 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 ISG20L2Q9H9L3 353 aaKnown RBP14.31□□□□□ -0.12
PERM1-201ENST00000341290 SEMA4GQ9NTN9 838 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 CLEC4AQ9UMR7 237 aa14.31□□□□□ -0.12
PERM1-201ENST00000341290 NUP210Q8TEM1 1887 aaPredicted RBP14.3□□□□□ -0.12
PERM1-201ENST00000341290 I3L521 148 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 LGI1O95970 557 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 PCCBP05166 539 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 GABRA5P31644 462 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 TRHRP34981 398 aaPredicted RBP14.3□□□□□ -0.12
PERM1-201ENST00000341290 TRIM23P36406 574 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 MAPK9P45984 424 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 CCR8P51685 355 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 ST8SIA6P61647 398 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 RAB40BQ12829 278 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 IDNKQ5T6J7 187 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 LCTLQ6UWM7 567 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 NKAIN4Q8IVV8 208 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 MRPL43Q8N983 215 aaKnown RBP14.3□□□□□ -0.12
PERM1-201ENST00000341290 OR2L2Q8NH16 312 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 SETD7Q8WTS6 366 aaKnown RBP14.3□□□□□ -0.12
PERM1-201ENST00000341290 ARHGAP9Q9BRR9 750 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 PPP1R3EQ9H7J1 279 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 LOC105378220A0A1B0GUY1 285 aaPredicted RBP14.3□□□□□ -0.12
PERM1-201ENST00000341290 TRIM77I1YAP6 450 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 GABRPO00591 440 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 PIP5K1CO60331 668 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 MYOGP15173 224 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 ZNF250P15622 560 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 FUT1P19526 365 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 KELP23276 732 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 IL32P24001 234 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 CLDN2P57739 230 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 TPBGQ13641 420 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 SMARCD3Q6STE5 483 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 AMZ2Q86W34 360 aa14.3□□□□□ -0.12
PERM1-201ENST00000341290 OR4M2Q8NGB6 313 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms