RNA–Protein interactions for RNA: ENST00000340623.4

C2orf88-201, Transcript of chromosome 2 open reading frame 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C2orf88, Length 4,035 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C2orf88-201ENST00000340623 USE1Q9NZ43 259 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 PTGFRNQ9P2B2 879 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 ASB4Q9Y574 426 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 A6NL46 340 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 TFAP2AP05549 437 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 CASRP41180 1078 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 ENTPD1P49961 510 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 RELAQ04206 551 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 TARDBPQ13148 414 aaKnown RBP eCLIP10.97□□□□□ -0.651e-6■■■■□ 23.1
C2orf88-201ENST00000340623 NODALQ96S42 347 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 SPATA9Q9BWV2 254 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 PRRG3Q9BZD7 231 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 APMAPQ9HDC9 416 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 OCIAD1Q9NX40 245 aa10.97□□□□□ -0.65
C2orf88-201ENST00000340623 NSG1A0A0A6YYJ2 146 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 TRBV11-1A0A0K0K1C0 115 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 M0R3H8 397 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 TNFSF14O43557 240 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 TNFSF15O95150 251 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 ADGRG5Q8IZF4 528 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 OR10G2Q8NGC3 310 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 OR4K17Q8NGC6 315 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 GPATCH1Q9BRR8 931 aaKnown RBP10.96□□□□□ -0.65
C2orf88-201ENST00000340623 ZNF385DQ9H6B1 395 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.96□□□□□ -0.65
C2orf88-201ENST00000340623 MAN2B2Q9Y2E5 1009 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 H0YIG0 161 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 ZNF182P17025 639 aaPredicted RBP10.96□□□□□ -0.65
C2orf88-201ENST00000340623 PCGF2P35227 344 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 CHRNEQ04844 493 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 WDR36Q8NI36 951 aaKnown RBP10.96□□□□□ -0.65
C2orf88-201ENST00000340623 MVB12AQ96EY5 273 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 C5orf34Q96MH7 638 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 TREX2Q9BQ50 279 aaPredicted RBP10.96□□□□□ -0.65
C2orf88-201ENST00000340623 IFT52Q9Y366 437 aa10.96□□□□□ -0.65
C2orf88-201ENST00000340623 MYLKQ15746 1914 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 ELOA3DA6NLF2 546 aaPredicted RBP10.96□□□□□ -0.66
C2orf88-201ENST00000340623 A8MVJ9 347 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 PLD2O14939 933 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 ALOX12BO75342 701 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 NADKO95544 446 aaPredicted RBP10.96□□□□□ -0.66
C2orf88-201ENST00000340623 SMIM18P0DKX4 95 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 RCVRNP35243 200 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 HOXC5Q00444 222 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 ELOA3BQ3SY89 546 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 PWWP2BQ6NUJ5 590 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 UGT2A3Q6UWM9 527 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 UBE3DQ7Z6J8 389 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 ZZZ3Q8IYH5 903 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 MARVELD2Q8N4S9 558 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 DNAJC22Q8N4W6 341 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 FAM86B1Q8N7N1 296 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 ELOA3Q8NG57 546 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 OR5K1Q8NHB7 308 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 PIGXQ8TBF5 258 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 TEX47Q8TBZ9 253 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 SLC38A5Q8WUX1 472 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 OR10A5Q9H207 317 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 GPN2Q9H9Y4 310 aaPredicted RBP10.96□□□□□ -0.66
C2orf88-201ENST00000340623 SLC6A13Q9NSD5 602 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 MMACHCQ9Y4U1 282 aa10.96□□□□□ -0.66
C2orf88-201ENST00000340623 IGHV5-10-1A0A0J9YXX1 117 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 ANKRD28O15084 1053 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 AK1P00568 194 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 PRKAR1AP10644 381 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 CSF2RBP32927 897 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 EPS8Q12929 822 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 VEZF1Q14119 521 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 DSG2Q14126 1118 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 DCST2Q5T1A1 773 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 HES3Q5TGS1 186 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 ANKRD34AQ69YU3 496 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 B3GNT8Q7Z7M8 397 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 OR7G2Q8NG99 324 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 SFXN5Q8TD22 340 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 DIO2Q92813 273 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 NEURL3Q96EH8 262 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 MTHFD2LQ9H903 347 aaPredicted RBP10.95□□□□□ -0.66
C2orf88-201ENST00000340623 UCK1Q9HA47 277 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 KCNK5O95279 499 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 SOX14O95416 240 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 DLGAP3O95886 979 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 ARAFP10398 606 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 WDR74Q6RFH5 385 aaPredicted RBP10.95□□□□□ -0.66
C2orf88-201ENST00000340623 C11orf16Q9NQ32 467 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 SCN2AQ99250 2005 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 A0A0G2JPF8 293 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 HNRNPCL2B2RXH8 293 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 HNRNPCL3B7ZW38 293 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 HNRNPCL4P0DMR1 293 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 CKMT1AP12532 417 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 DNAJA1P31689 397 aaKnown RBP10.95□□□□□ -0.66
C2orf88-201ENST00000340623 CYP4Z2PQ8N1L4 340 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 C7orf57Q8NEG2 295 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 C12orf43Q96C57 262 aaKnown RBP10.95□□□□□ -0.66
C2orf88-201ENST00000340623 ALPK1Q96QP1 1244 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 ABCB10Q9NRK6 738 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 TOR4AQ9NXH8 423 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 DAPK2Q9UIK4 370 aa10.95□□□□□ -0.66
C2orf88-201ENST00000340623 CEP250Q9BV73 2442 aa10.95□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms