RNA–Protein interactions for RNA: ENST00000340477.9

SYNE4-202, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SYNE4, Length 1,004 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-202ENST00000340477 HHATLQ9HCP6 504 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 GALNT9Q9HCQ5 603 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 SDHAF3Q9NRP4 125 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 FAM120CQ9NX05 1096 aaKnown RBP17.56■□□□□ 0.4
SYNE4-202ENST00000340477 TINAGQ9UJW2 476 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 PCDHGB3Q9Y5G1 929 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 WIF1Q9Y5W5 379 aa17.56■□□□□ 0.4
SYNE4-202ENST00000340477 DOPEY2Q9Y3R5 2298 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 GIMAP1-GIMAP5A0A087WTJ2 511 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 PRSS51A0A1B0GVH4 220 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 SNPHO15079 494 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 UBDO15205 165 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 LDLRP01130 860 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 HMGN2P05204 90 aaKnown RBP17.55■□□□□ 0.4
SYNE4-202ENST00000340477 CYP4B1P13584 511 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 EVI2BP34910 448 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 STX1BP61266 288 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 HBA1P69905 142 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 LRRC74AQ0VAA2 488 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 FAM174BQ3ZCQ3 159 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 ADAMTS15Q8TE58 950 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 NUDT8Q8WV74 236 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 CKAP2Q8WWK9 683 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 PIK3R3Q92569 461 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 GIMAP5Q96F15 307 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 STACQ99469 402 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 ACTRT3Q9BYD9 372 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 ACKR4Q9NPB9 350 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 SLCO1B3Q9NPD5 702 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 DIDO1Q9BTC0 2240 aaKnown RBP17.55■□□□□ 0.4
SYNE4-202ENST00000340477 ZNF407Q9C0G0 2248 aa17.55■□□□□ 0.4
SYNE4-202ENST00000340477 DNAJC13O75165 2243 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 RNF103-CHMP3A0A140T963 221 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 AQP7O14520 342 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 ANKRD28O15084 1053 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 RFPL3SP0C7P2 107 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 ACP2P11117 423 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 POU6F2P78424 691 aaPredicted RBP17.54■□□□□ 0.4
SYNE4-202ENST00000340477 PDCD4Q53EL6 469 aaKnown RBP17.54■□□□□ 0.4
SYNE4-202ENST00000340477 SPANXN4Q5MJ08 99 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 DESI1Q6ICB0 168 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 CLECL1Q8IZS7 167 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 TRIML2Q8N7C3 387 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 OR5AK3PQ8NH89 298 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 HOXB13Q92826 284 aaPredicted RBP17.54■□□□□ 0.4
SYNE4-202ENST00000340477 GNRHR2Q96P88 292 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 YIPF4Q9BSR8 244 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 G6PC3Q9BUM1 346 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 TBL1XR1Q9BZK7 514 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 TP63Q9H3D4 680 aaPredicted RBP17.54■□□□□ 0.4
SYNE4-202ENST00000340477 TCF7L2Q9NQB0 619 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 DUSP22Q9NRW4 184 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 PPP4R1LQ9P1A2 415 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 ACAD8Q9UKU7 415 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 LIPGQ9Y5X9 500 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 GPR45Q9Y5Y3 372 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 NCKAP5O14513 1909 aa17.54■□□□□ 0.4
SYNE4-202ENST00000340477 A0A1B0GVC2 190 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 GXYLT2A0PJZ3 443 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 FIGNL2A6NMB9 653 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 NPIPA2E9PIF3 369 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 NPIPA3F8WFD2 350 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 SCO2O43819 266 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 SLC22A3O75751 556 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 CBR3O75828 277 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 CPSF4O95639 269 aaKnown RBP17.53■□□□□ 0.4
SYNE4-202ENST00000340477 CELA3AP09093 270 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 ATP6V1C1P21283 382 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 LCN1P31025 176 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 UFM1P61960 85 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 DUSP5Q16690 384 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 WLSQ5T9L3 541 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 CDC73Q6P1J9 531 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 EPGNQ6UW88 154 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 RPTNQ6XPR3 784 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 MAVSQ7Z434 540 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 ANKRD46Q86W74 232 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 PLCZ1Q86YW0 608 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 SLC16A11Q8NCK7 471 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 OR4K17Q8NGC6 315 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 C16orf58Q96GQ5 468 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 SLC35G5Q96KT7 338 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 MARK4Q96L34 752 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 OR52B2Q96RD2 323 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 BTBD2Q9BX70 525 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 PIGUQ9H490 435 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 MED4Q9NPJ6 270 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 ZNF446Q9NWS9 450 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 GIN1Q9NXP7 522 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 ZIM2Q9NZV7 527 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 PTPN13Q12923 2485 aa17.53■□□□□ 0.4
SYNE4-202ENST00000340477 NUP214P35658 2090 aaPredicted RBP17.52■□□□□ 0.4
SYNE4-202ENST00000340477 C15orf38-AP3S2A0A0A6YYH1 394 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 C2orf72A6NCS6 295 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 ZNF195O14628 629 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 UTS2O95399 124 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 IL6P05231 212 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 HPNP05981 417 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 HPGDP15428 266 aa17.52■□□□□ 0.4
SYNE4-202ENST00000340477 PTPN6P29350 595 aa17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms