RNA–Protein interactions for RNA: ENST00000340424.4

SIRPB3P-201, Transcript of signal regulatory protein beta 3, pseudogene, humanhuman

BASIC

Gene SIRPB3P, Length 1,216 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPB3P-201ENST00000340424 SH3BP4Q9P0V3 963 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 NTMQ9P121 344 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 CBLCQ9ULV8 474 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 MAPRE3Q9UPY8 281 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 EPB41L3Q9Y2J2 1087 aaPredicted RBP12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 MRPS18CQ9Y3D5 142 aaKnown RBP12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 FAM215AQ9Y5M1 114 aa12.17□□□□□ -0.46
SIRPB3P-201ENST00000340424 NCKAP5O14513 1909 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 GNB5O14775 395 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 DHRS4L1P0CG22 281 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 EVI2BP34910 448 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 TRPC1P48995 793 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 CLK3P49761 638 aaKnown RBP12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 HSPB3Q12988 150 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 CDSNQ15517 529 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 RTL6Q6ICC9 239 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZCCHC12Q6PEW1 402 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 GDF7Q7Z4P5 450 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 PLCZ1Q86YW0 608 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 CDRT4Q8N9R6 151 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 WDSUB1Q8N9V3 476 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 ACBD4Q8NC06 268 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 FAM83FQ8NEG4 500 aaPredicted RBP12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 AGR3Q8TD06 166 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 GFM2Q969S9 779 aaKnown RBP12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 MS4A4EQ96PG1 132 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 PRPF18Q99633 342 aaKnown RBP12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 TIMP4Q99727 224 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 OR2B2Q9GZK3 357 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 CENPHQ9H3R5 247 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 SDHAF3Q9NRP4 125 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 ATP6V1HQ9UI12 483 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZDHHC2Q9UIJ5 367 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 CACNA1CQ13936 2221 aa12.16□□□□□ -0.46
SIRPB3P-201ENST00000340424 HSPB2A8KAH6 182 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 SCAMP2O15127 329 aaKnown RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 AKAP10O43572 662 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 PEX11AO75192 247 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 SOX30O94993 753 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 KCNH1O95259 989 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 IL33O95760 270 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 EPPINO95925 133 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 PRPS1L1P21108 318 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 SRD5A2P31213 254 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 ARRB2P32121 409 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZFP36L2P47974 494 aaKnown RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 ABCE1P61221 599 aaKnown RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 PRR5P85299 388 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 CHI3L2Q15782 390 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 HSPB2Q16082 182 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 SLC25A35Q3KQZ1 300 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 C6orf136Q5SQH8 315 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 ZNF551Q7Z340 670 aaPredicted RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 IFNEQ86WN2 208 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 LACC1Q8IV20 430 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 MCEMP1Q8IX19 187 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 LRRC34Q8IZ02 419 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 RPRMLQ8N4K4 120 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 FNDC5Q8NAU1 212 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 OR10Q1Q8NGQ4 319 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 HOXB13Q92826 284 aaPredicted RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 ABTB1Q969K4 478 aaPredicted RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 CIDECQ96AQ7 238 aaPredicted RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 EFHD2Q96C19 240 aaPredicted RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 TUBGCP3Q96CW5 907 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 TREX2Q9BQ50 279 aaPredicted RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 USB1Q9BQ65 265 aaKnown RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 ENKD1Q9H0I2 346 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 FAM120CQ9NX05 1096 aaKnown RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 ALKBH4Q9NXW9 302 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 ASIC5Q9NY37 505 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 TNFRSF10DQ9UBN6 386 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 BAIAP2L1Q9UHR4 511 aa12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 EIF3LQ9Y262 564 aaKnown RBP12.15□□□□□ -0.46
SIRPB3P-201ENST00000340424 EMC8O43402 210 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 SKAP2O75563 359 aaPredicted RBP12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 CYP4B1P13584 511 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 BMP7P18075 431 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 LCN1P31025 176 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 TIMP3P35625 211 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 MAP3K8P41279 467 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 GAS1P54826 345 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 C21orf58P58505 322 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 GAB1Q13480 694 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 GANABQ14697 944 aaKnown RBP12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 ACSF3Q4G176 576 aaPredicted RBP12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 EIPR1Q53HC9 387 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 WIPI1Q5MNZ9 446 aaPredicted RBP12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 CPTPQ5TA50 214 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 DESI1Q6ICB0 168 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 ANKRD26P1Q6NSI1 321 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 AAGABQ6PD74 315 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 ENPP6Q6UWR7 440 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 OR4N2Q8NGD1 307 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 OR14L1PQ8NHC6 308 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 CLHC1Q8NHS4 586 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 ZPLD1Q8TCW7 415 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 UGT2B28Q9BY64 529 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 NEUROD4Q9HD90 331 aa12.14□□□□□ -0.47
SIRPB3P-201ENST00000340424 SERHLQ9NQF3 203 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms