RNA–Protein interactions for RNA: ENST00000339701.7

CSMD3-202, Transcript of CUB and Sushi multiple domains 3, humanhuman

TSL 1 (best)

Gene CSMD3, Length 10,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD3-202ENST00000339701 GLYATL1P3A0A0U1RQE8 302 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 A0A0U1RQJ8 604 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TMEM200CA6NKL6 621 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TULP2O00295 520 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 DFFBO76075 338 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 STBD1O95210 358 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 MMP8P22894 467 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ARL3P36405 182 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZXDAP98168 799 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 PRRT3Q5FWE3 981 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 UQCC3Q6UW78 93 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 FBXO15Q8NCQ5 510 aaPredicted RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 SLC13A3Q8WWT9 602 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 FCAMRQ8WWV6 532 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 THAP4Q8WY91 577 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 LURAP1Q96LR2 239 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TGM7Q96PF1 710 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 TSSK3Q96PN8 268 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 RNF157Q96PX1 679 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 UTP23Q9BRU9 249 aaKnown RBP3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ATG10Q9H0Y0 220 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 Q9N2J8 555 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF355PQ9NSJ1 428 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ETNK2Q9NVF9 386 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 GFOD1Q9NXC2 390 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 FAM96BQ9Y3D0 163 aa3.13□□□□□ -1.91
CSMD3-202ENST00000339701 ELOA3CA0A087WX78 387 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 EEF1E1-BLOC1S5C9J1V9 151 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 BOLA2-SMG1P6H3BVE0 249 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 EEF1E1O43324 174 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PCDH7O60245 1069 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CILPO75339 1184 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 NME6O75414 186 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 RAF1P04049 648 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 FBP1P09467 338 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CXCL8P10145 99 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CHRNB1P11230 501 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 IFNGR1P15260 489 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CD1EP15812 388 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ABCD3P28288 659 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 MAP3K8P41279 467 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 TRA2BP62995 288 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PPA1Q15181 289 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ZACNQ401N2 412 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 HMBOX1Q6NT76 420 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DPPA2Q7Z7J5 298 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 LRRTM4Q86VH4 590 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 KLBQ86Z14 1044 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SNX29P2Q8IUI4 249 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ENDOVQ8N8Q3 282 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 OR8K5Q8NH50 307 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 GPR151Q8TDV0 419 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 RXFP2Q8WXD0 754 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ASB17Q8WXJ9 295 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 MYRFLQ96LU7 910 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 UQCC2Q9BRT2 126 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PBX4Q9BYU1 374 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 MRPL22Q9NWU5 206 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PPP1R14DQ9NXH3 145 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 TP53TG5Q9Y2B4 290 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PCDHGC4Q9Y5F7 938 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ETV7Q9Y603 341 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PP2D1A8MPX8 630 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SLC31A2O15432 143 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 RGS9O75916 674 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 GLCEO94923 617 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 FMO4P31512 558 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DEFA6Q01524 100 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 NFATC3Q12968 1075 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CST9Q5W186 159 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 NCEH1Q6PIU2 408 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 FUNDC1Q8IVP5 155 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 C4orf33Q8N1A6 199 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 CISD2Q8N5K1 135 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DAZLQ92904 295 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SGIP1Q9BQI5 828 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 RTL8AQ9BWD3 113 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SLC19A3Q9BZV2 496 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 HRH4Q9H3N8 390 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF696Q9H7X3 374 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 MOB1AQ9H8S9 216 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SACM1LQ9NTJ5 587 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 AGPAT5Q9NUQ2 364 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 GRHL1Q9NZI5 618 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ICKQ9UPZ9 632 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SLC22A14Q9Y267 594 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 RBMX2Q9Y388 322 aaKnown RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 NPFFR2Q9Y5X5 522 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 PLXND1Q9Y4D7 1925 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 SURF4O15260 269 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 TGM5O43548 720 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 B3GALT2O43825 422 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 MMP20O60882 483 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ZNF821O75541 412 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 STK17BO94768 372 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 IL1AP01583 271 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 ICAM3P32942 547 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 FRKP42685 505 aaPredicted RBP3.12□□□□□ -1.91
CSMD3-202ENST00000339701 TAP2Q03519 686 aa3.12□□□□□ -1.91
CSMD3-202ENST00000339701 DPYSL3Q14195 570 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms