RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 OR4C6Q8NH72 309 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 STACQ99469 402 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 U3KQA8 63 aa20.86■□□□□ 0.93
PDLIM2-203ENST00000339162 A0A1W2PRQ8 180 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 AGAP5A6NIR3 686 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 FAAHO00519 579 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 GGT2P36268 569 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 RPS6KA3P51812 740 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 RGS8P57771 180 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 IGLV3-21P80748 117 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 TARDBPQ13148 414 aaKnown RBP eCLIP20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 DGCR6Q14129 220 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 PTGES3Q15185 160 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 C1orf189Q5VU69 101 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 BROXQ5VW32 411 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 PGBD2Q6P3X8 592 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 GPR135Q8IZ08 494 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 TMEM105Q8N8V8 129 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 RCBTB1Q8NDN9 531 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 APH1BQ8WW43 257 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 ARSGQ96EG1 525 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 DUSP23Q9BVJ7 150 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 CCDC90BQ9GZT6 254 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 SYNDIG1Q9H7V2 258 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 FOLH1BQ9HBA9 442 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 ERVK-19Q9WJR5 959 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 HSPE1-MOB4S4R3N1 261 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 TNRC6BQ9UPQ9 1833 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 ARRDC5A6NEK1 342 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 WBP4O75554 376 aaKnown RBP20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 MAPK10P53779 464 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 POU6F2P78424 691 aaPredicted RBP20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 LPAL2Q16609 132 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 ZCCHC12Q6PEW1 402 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 DHRS4L2Q6PKH6 230 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 ZNF619Q8N2I2 560 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 EID2Q8N6I1 236 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 ADAMTS18Q8TE60 1221 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 PTCHD1Q96NR3 888 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 FGF21Q9NSA1 209 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 SEMA4GQ9NTN9 838 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 KLHL28Q9NXS3 571 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 BLOC1S6Q9UL45 172 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 ZNF232Q9UNY5 417 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 IFT52Q9Y366 437 aa20.85■□□□□ 0.93
PDLIM2-203ENST00000339162 PRKNO60260 465 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 CHMP24386 653 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 HSD17B7P56937 341 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 SMIM11AP58511 58 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 LARS2Q15031 903 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 MINDY4Q4G0A6 757 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 GPR141Q7Z602 305 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 SPARTQ8N0X7 666 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 OR4K5Q8NGD3 323 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 FANCEQ9HB96 536 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 SATB2Q9UPW6 733 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 HEMK1Q9Y5R4 338 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 NCOR1O75376 2440 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 AHCYL1O43865 530 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 ABCB7O75027 752 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 COQ9O75208 318 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 CCNYL3P0C7X3 344 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 TNNI3P19429 210 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 GSTT1P30711 240 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 KRT20P35900 424 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 STT3AP46977 705 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 ESRRGP62508 458 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 NR0B2Q15466 257 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 PRSS42Q7Z5A4 293 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 PRSS58Q8IYP2 241 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 CARFQ8N187 725 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 CLIP3Q96DZ5 547 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 NDC1Q9BTX1 674 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 TRIM45Q9H8W5 580 aaPredicted RBP20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 CACYBPQ9HB71 228 aaKnown RBP20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 LANCL2Q9NS86 450 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 SEMA5BQ9P283 1151 aa20.84■□□□□ 0.93
PDLIM2-203ENST00000339162 A0A1W2PQM1 296 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 KCNK2O95069 426 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 NKX2-2O95096 273 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 ADAP00813 363 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 CCDC159P0C7I6 412 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 PTNP21246 168 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 TOP3AQ13472 1001 aaPredicted RBP20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 RAB39AQ14964 217 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 ENTPD8Q5MY95 495 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 PRR23CQ6ZRP0 262 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 PARP8Q8N3A8 854 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 TSC22D3Q99576 134 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 UCK2Q9BZX2 261 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 AMBNQ9NP70 447 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 REV1Q9UBZ9 1251 aa20.83■□□□□ 0.93
PDLIM2-203ENST00000339162 A8MUA0 341 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 BCAS1O75363 584 aaPredicted RBP20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 OXSR1O95747 527 aaPredicted RBP20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 GKN3PP0CG01 181 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 PRG2P13727 222 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 CRISP1P54107 249 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 NUP107P57740 925 aa20.82■□□□□ 0.92
PDLIM2-203ENST00000339162 EEF1A1P68104 462 aaKnown RBP20.82■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 51.2 ms