RNA–Protein interactions for RNA: ENST00000338963.6

NEDD4-201, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene NEDD4, Length 7,019 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-201ENST00000338963 WNT9AO14904 365 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FAM157BP0CG42 384 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 HGFP14210 728 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 AKR1A1P14550 325 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 CD82P27701 267 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 CCKARP32238 428 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SLC11A2P49281 568 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 WNT4P56705 351 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 RPL19P84098 196 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ABHD18Q0P651 414 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SPHARQ15513 63 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF800Q2TB10 664 aaPredicted RBP eCLIP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PLK5Q496M5 336 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 AWAT2Q6E213 333 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR10K2Q6IF99 312 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 LARP4Q71RC2 724 aaKnown RBP eCLIP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SMIM5Q71RC9 77 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ZFPM1Q8IX07 1006 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PHACTR4Q8IZ21 702 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR5M3Q8NGP4 307 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR9A4Q8NGU2 314 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 TFGQ92734 400 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 EDAQ92838 391 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FAM210BQ96KR6 192 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 NECTIN4Q96NY8 510 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PPP1R3EQ9H7J1 279 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SEC61A2Q9H9S3 476 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 KLHL28Q9NXS3 571 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 MOKQ9UQ07 419 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 NOD1Q9Y239 953 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PPP5D1E7EU14 171 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 GSTZ1O43708 216 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 RGS9O75916 674 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PRAMEF12O95522 483 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 C22orf31O95567 290 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 LY86O95711 162 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 TSPAN15O95858 294 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SRPRAP08240 638 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 CD3GP09693 182 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 YWHAQP27348 245 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 APEX1P27695 318 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ADNP2Q6IQ32 1131 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 LAIR2Q6ISS4 152 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FSTL4Q6MZW2 842 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 RBMS3Q6XE24 437 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 UNC93AQ86WB7 457 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SLC30A8Q8IWU4 369 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 BAP18Q8IXM2 172 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ZNF614Q8N883 585 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR5M1Q8NGP8 315 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SAT2Q96F10 170 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PIWIL1Q96J94 861 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 MS4A4EQ96PG1 132 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 OR4K3Q96R72 315 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 FDXACB1Q9BRP7 624 aaPredicted RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 DDA1Q9BW61 102 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 POLR2J2Q9GZM3 115 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PCBD2Q9H0N5 130 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SLITRK2Q9H156 845 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 SFXN1Q9H9B4 322 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 GPR173Q9NS66 373 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 DCAF13Q9NV06 445 aaKnown RBP3.93□□□□□ -1.78
NEDD4-201ENST00000338963 ASB6Q9NWX5 421 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 HACL1Q9UJ83 578 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 PCDHB1Q9Y5F3 818 aa3.93□□□□□ -1.78
NEDD4-201ENST00000338963 COLCA2A8K830 154 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 VSTM5A8MXK1 200 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 FXYD1O00168 92 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 FFAR3O14843 346 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 GPR42O15529 346 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SYT7O43581 403 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 DNAJB6O75190 326 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 MLYCDO95822 493 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 AIFM1O95831 613 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 IFNA21P01568 189 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 PPBPP02775 128 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ADRA2BP18089 450 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 ADORA1P30542 326 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 BDKRB1P46663 353 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 MTNR1BP49286 362 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 INPP5JQ15735 1006 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 LIPKQ5VXJ0 399 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 NKAIN2Q5VXU1 208 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 SLC51AQ86UW1 340 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CBLN2Q8IUK8 224 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 GPD1LQ8N335 351 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 DNAJC5GQ8N7S2 189 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 CPEB3Q8NE35 698 aaKnown RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 OR1J1Q8NGS3 322 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 PARK7Q99497 189 aaKnown RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 VPS25Q9BRG1 176 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 FAM126AQ9BYI3 521 aaPredicted RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 MINPP1Q9UNW1 487 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 EXOGQ9Y2C4 368 aaKnown RBP3.92□□□□□ -1.78
NEDD4-201ENST00000338963 FAM95CA0A1B0GW59 222 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 AHRRA9YTQ3 701 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 J3KR12 359 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 B4GALT5O43286 388 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 MMP3P08254 477 aa3.92□□□□□ -1.78
NEDD4-201ENST00000338963 PIGAP37287 484 aa3.92□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms