RNA–Protein interactions for RNA: ENST00000337659.10

PRPF4B-201, Transcript of pre-mRNA processing factor 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF4B, Length 4,415 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-201ENST00000337659 Q6ZSR3 168 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 TRILQ7L0X0 811 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 TSPAN14Q8NG11 270 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 GIPC3Q8TF64 312 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 PHOX2BQ99453 314 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 TIMP4Q99727 224 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 SLC22A11Q9NSA0 550 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 BAIAP2Q9UQB8 552 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 RNF6Q9Y252 685 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 B3GNT3Q9Y2A9 372 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 CA5BQ9Y2D0 317 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 SSUH2Q9Y2M2 353 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 MRPS18CQ9Y3D5 142 aaKnown RBP4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 SIT1Q9Y3P8 196 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 ANKRD12Q6UB98 2062 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 GNG14A0A1W2PPG7 69 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 BHLHE40O14503 412 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 SERPINB7O75635 380 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 OR6B1O95007 311 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 HMGN2P05204 90 aaKnown RBP4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 CDK1P06493 297 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 IGFBP5P24593 272 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 PPICP45877 212 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 RBBP5Q15291 538 aaKnown RBP4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 CCDC85BQ15834 202 aaPredicted RBP4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 CNPY1Q3B7I2 92 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 SMUG1Q53HV7 270 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 DGAT2L6Q6ZPD8 337 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 VTCN1Q7Z7D3 282 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 KIF18BQ86Y91 864 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 SLC35F3Q8IY50 421 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 C8orf59Q8N0T1 100 aaPredicted RBP4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 ANKK1Q8NFD2 765 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 HMGB4Q8WW32 186 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 LZICQ8WZA0 190 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 FIG4Q92562 907 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 SLC46A1Q96NT5 459 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 MUS81Q96NY9 551 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 SECISBP2Q96T21 854 aaKnown RBP4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 MED18Q9BUE0 208 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 MKKSQ9NPJ1 570 aaPredicted RBP4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 TIMMDC1Q9NPL8 285 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 SRPK3Q9UPE1 567 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 ENTPD4Q9Y227 616 aa4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 CFAP20Q9Y6A4 193 aaKnown RBP4.98□□□□□ -1.61
PRPF4B-201ENST00000337659 IGHV5-51A0A0C4DH38 117 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 TMEM200CA6NKL6 621 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 IQCJ-SCHIP1C9J366 451 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 SLC31A1O15431 190 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 DLGAP3O95886 979 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 IGKV1D-16P01601 117 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 CT62P0C5K7 136 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 RNH1P13489 461 aaKnown RBP4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 ID4P47928 161 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 NCBP2P52298 156 aaKnown RBP eCLIP4.97□□□□□ -1.618e-11■■■□□ 15.5
PRPF4B-201ENST00000337659 MAP2K6P52564 334 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 MC2RQ01718 297 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 GPR50Q13585 617 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 IL10RAQ13651 578 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 IL11RAQ14626 422 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 NCF4Q15080 339 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 ZNF800Q2TB10 664 aaPredicted RBP eCLIP4.97□□□□□ -1.612e-13■■□□□ 11.6
PRPF4B-201ENST00000337659 NADK2Q4G0N4 442 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 AADACL4Q5VUY2 407 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 ZNF621Q6ZSS3 439 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 GNPDA2Q8TDQ7 276 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 CRELD1Q96HD1 420 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 HS6ST2Q96MM7 605 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 WDR77Q9BQA1 342 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 ZNF559Q9BR84 538 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 FOLH1BQ9HBA9 442 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 CPNE5Q9HCH3 593 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 MIEF1Q9NQG6 463 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 N6AMT1Q9Y5N5 214 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 LOC102725191A0A1B0GVB3 256 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 FADS1O60427 444 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 PRAMEF2O60811 474 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 SC5DO75845 299 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 KCNK2O95069 426 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 LRATO95237 230 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 IFNW1P05000 195 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 HTR2AP28223 471 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 MANFP55145 182 aaKnown RBP4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 RAB15P59190 212 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 SKP2Q13309 424 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 GRM7Q14831 915 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 NR0B2Q15466 257 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 DUSP5Q16690 384 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 THEMIS2Q5TEJ8 643 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 PIP4P1Q86T03 277 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 ATCAYQ86WG3 371 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 PLXDC1Q8IUK5 500 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 CCDC103Q8IW40 242 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 OR14A16Q8NHC5 309 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 ACOT11Q8WXI4 607 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 N4BP2L2Q92802 583 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 KISS1RQ969F8 398 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 HSPBAP1Q96EW2 488 aa4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 NMNAT1Q9HAN9 279 aaPredicted RBP4.97□□□□□ -1.61
PRPF4B-201ENST00000337659 OSGIN1Q9UJX0 560 aa4.97□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms