RNA–Protein interactions for RNA: ENST00000335725.8

TDP1-201, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TDP1, Length 3,702 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-201ENST00000335725 GNA15P30679 374 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 TDGF1P3P51864 188 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 SESN2P58004 480 aaPredicted RBP8.13□□□□□ -1.11
TDP1-201ENST00000335725 PSMA6P60900 246 aaKnown RBP8.13□□□□□ -1.11
TDP1-201ENST00000335725 SLBPQ14493 270 aaKnown RBP eCLIP8.13□□□□□ -1.11
TDP1-201ENST00000335725 TDRD10Q5VZ19 366 aaKnown RBP8.13□□□□□ -1.11
TDP1-201ENST00000335725 SLC39A4Q6P5W5 647 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 LANCL3Q6ZV70 420 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 TECPR1Q7Z6L1 1165 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 RELL2Q8NC24 303 aaPredicted RBP8.13□□□□□ -1.11
TDP1-201ENST00000335725 OR4C6Q8NH72 309 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 NPRL2Q8WTW4 380 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 DDX17Q92841 729 aaKnown RBP8.13□□□□□ -1.11
TDP1-201ENST00000335725 AMDHD1Q96NU7 426 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 MGME1Q9BQP7 344 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 TLNRD1Q9H1K6 362 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 BRF2Q9HAW0 419 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 TRPC4Q9UBN4 977 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 PCDHB8Q9UN66 801 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 OR10H1Q9Y4A9 318 aa8.13□□□□□ -1.11
TDP1-201ENST00000335725 ELOA3CA0A087WX78 387 aaPredicted RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 EREGO14944 169 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 MPZL2O60487 215 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 MMP3P08254 477 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 SNRPCP09234 159 aaKnown RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 ATF3P18847 181 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 DTYMKP23919 212 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 GKP32189 559 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 CEBPGP53567 150 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 CRISP3P54108 245 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 SLC22A10Q63ZE4 541 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 ZNF790Q6PG37 636 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 CYHR1Q6ZMK1 362 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 THNSL2Q86YJ6 484 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 HDDC3Q8N4P3 179 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 FAM71CQ8NEG0 241 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 CD99L2Q8TCZ2 262 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 EXTL1Q92935 676 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 UBE2FQ969M7 185 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 ACCSQ96QU6 501 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 GPN1Q9HCN4 374 aaPredicted RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 C2orf42Q9NWW7 574 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 TXNL4BQ9NX01 149 aaKnown RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 DNAJB11Q9UBS4 358 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 IL17BQ9UHF5 180 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 DYRK1BQ9Y463 629 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 IRAK3Q9Y616 596 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 ELOVL7A1L3X0 281 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 TBC1D3BA6NDS4 549 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 SYT5O00445 386 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 CXCR6O00574 342 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 SCN2BO60939 215 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 RDH16O75452 317 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 LSM8O95777 96 aaKnown RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 MT-CO1P00395 513 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 SYPP08247 313 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 GAAP10253 952 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 INSRRP14616 1297 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 CPN1P15169 458 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 ADCYAP1P18509 176 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 SPHARQ15513 63 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 ISXQ2M1V0 245 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 PAGE3Q5JUK9 113 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 C1orf220Q5T0J3 134 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 TMEM244Q5VVB8 128 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 FBXW9Q5XUX1 488 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 LEMD1Q68G75 181 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 TBC1D3GQ6DHY5 549 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 PLAG1Q6DJT9 500 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 OTOP2Q7RTS6 562 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 ZDHHC21Q8IVQ6 265 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 ISG20Q96AZ6 181 aaKnown RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 HMCESQ96FZ2 354 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 PYURFQ96I23 114 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 CCDC74BQ96LY2 380 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 GPR22Q99680 433 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 GABARAPL3Q9BY60 117 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 BCAS3Q9H6U6 928 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 KRCC1Q9NPI7 259 aaPredicted RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 EIF2B3Q9NR50 452 aaKnown RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 FAM86B1E9PN63 330 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 CLIC1O00299 241 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 TGOLN2O43493 480 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 TSPAN6O43657 245 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 SLC25A27O95847 323 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 ITGA5P08648 1049 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 NR2F1P10589 423 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 AKR1A1P14550 325 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 NFYBP25208 207 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 CDC34P49427 236 aaPredicted RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 GPR15P49685 360 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 STK19P49842 368 aaPredicted RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 POLR2JP52435 117 aaKnown RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 HSD11B2P80365 405 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 OGDHQ02218 1023 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 MLLT11Q13015 90 aaPredicted RBP8.12□□□□□ -1.11
TDP1-201ENST00000335725 TRA2AQ13595 282 aaKnown RBP eCLIP8.12□□□□□ -1.11
TDP1-201ENST00000335725 PWP1Q13610 501 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 PNLIPRP3Q17RR3 467 aa8.12□□□□□ -1.11
TDP1-201ENST00000335725 NPNTQ6UXI9 565 aa8.12□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms