RNA–Protein interactions for RNA: ENST00000334944.9

SF1-202, Transcript of splicing factor 1, humanhuman

TSL 1 (best) BASIC

Gene SF1, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-202ENST00000334944 TRAV6A0A075B6T7 132 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 IGKV1-8A0A0C4DH67 115 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 RPS10-NUDT3A0A1W2PQS6 291 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 SLC31A1O15431 190 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 PLATP00750 562 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 GGT2P36268 569 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 RUNX3Q13761 415 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 CST6Q15828 149 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 FBXO43Q4G163 708 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 ZNF57Q68EA5 555 aaPredicted RBP13.05□□□□□ -0.32
SF1-202ENST00000334944 XKRXQ6PP77 449 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 UNC5DQ6UXZ4 953 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 ZNF765Q7L2R6 523 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 RD3Q7Z3Z2 195 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 C6orf120Q7Z4R8 191 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 UBE3DQ7Z6J8 389 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 COMTD1Q86VU5 262 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 Q8N402 240 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 CXorf40BQ96DE9 158 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 FCRL4Q96PJ5 515 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 PIP5K1AQ99755 562 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 QRSL1Q9H0R6 528 aaKnown RBP13.05□□□□□ -0.32
SF1-202ENST00000334944 SYNPO2LQ9H987 977 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 GMEB2Q9UKD1 530 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 ANGPT4Q9Y264 503 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 POM121CA8CG34 1229 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 INMT-MINDY4F8WBC2 141 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 MPC2O95563 127 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 OR12D1P0DN82 309 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 ARAFP10398 606 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 FCARP24071 287 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 CCR8P51685 355 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 PTGES3Q15185 160 aaKnown RBP13.05□□□□□ -0.32
SF1-202ENST00000334944 TMEM31Q5JXX7 168 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 GDPD1Q8N9F7 314 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 GPR32P1Q8NGA4 272 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 OR4D11Q8NGI4 311 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 DOK4Q8TEW6 326 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 GEMIN6Q8WXD5 167 aaKnown RBP13.05□□□□□ -0.32
SF1-202ENST00000334944 SLC9A6Q92581 669 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 PITX2Q99697 317 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 MENTQ9BUN1 341 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 AICDAQ9GZX7 198 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 SERHL2Q9H4I8 314 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 WBP1LQ9NX94 342 aa13.05□□□□□ -0.32
SF1-202ENST00000334944 A0A1B0GVC2 190 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 A6NIN4 97 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 C4orf51C9J302 202 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 ANHXE9PGG2 379 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 LINC01565O15544 149 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 RAF1P04049 648 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 IFNW1P05000 195 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 PTNP21246 168 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 SSR2P43308 183 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 XCR1P46094 333 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 AGFG1P52594 562 aaKnown RBP13.04□□□□□ -0.32
SF1-202ENST00000334944 SRP54P61011 504 aaKnown RBP13.04□□□□□ -0.32
SF1-202ENST00000334944 EIF4HQ15056 248 aaKnown RBP13.04□□□□□ -0.32
SF1-202ENST00000334944 SEC23BQ15437 767 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 ZNF630Q2M218 657 aaPredicted RBP13.04□□□□□ -0.32
SF1-202ENST00000334944 BCL2L15Q5TBC7 163 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 TIGD3Q6B0B8 471 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 REEP3Q6NUK4 255 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 ASB18Q6ZVZ8 466 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 TRILQ7L0X0 811 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 OR8K5Q8NH50 307 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 OR14C36Q8NHC7 312 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 SETD7Q8WTS6 366 aaKnown RBP13.04□□□□□ -0.32
SF1-202ENST00000334944 ASB12Q8WXK4 309 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 RBPMSQ93062 196 aaKnown RBP13.04□□□□□ -0.32
SF1-202ENST00000334944 UBE2E3Q969T4 207 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 MARVELD3Q96A59 401 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 ARMC5Q96C12 935 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 TRMT61BQ9BVS5 477 aaKnown RBP13.04□□□□□ -0.32
SF1-202ENST00000334944 GABARAPL3Q9BY60 117 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 HEXA-AS1Q9H8Q6 139 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 NMNAT1Q9HAN9 279 aaPredicted RBP13.04□□□□□ -0.32
SF1-202ENST00000334944 IFT46Q9NQC8 304 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 CYB5R1Q9UHQ9 305 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 ZFR2Q9UPR6 939 aaKnown RBP13.04□□□□□ -0.32
SF1-202ENST00000334944 M0R3H8 397 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 NDUFS4O43181 175 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 NTN1O95631 604 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 UQCRC2P22695 453 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 RAB8AP61006 207 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 RIN1Q13671 783 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 ZNF793Q6ZN11 406 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 KRT73Q86Y46 540 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 OR6M1Q8NGM8 313 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 SEC22CQ9BRL7 303 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 TMEM38AQ9H6F2 299 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 HRH3Q9Y5N1 445 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 PRAMEF27A3QJZ7 478 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 BET1O15155 118 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 LYRM1O43325 122 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 SLC28A2O43868 658 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 CCNB2O95067 398 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 APOL3O95236 402 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 GDI1P31150 447 aa13.04□□□□□ -0.32
SF1-202ENST00000334944 PCBP3P57721 371 aaKnown RBP13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms