RNA–Protein interactions for RNA: ENST00000332395.6

DDX28-201, Transcript of DEAD-box helicase 28, humanhuman

APPRIS P1 BASIC

Gene DDX28, Length 2,169 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX28-201ENST00000332395 MTHFD2LQ9H903 347 aaPredicted RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 ANKHQ9HCJ1 492 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 ZNF443Q9Y2A4 671 aaPredicted RBP16.26■□□□□ 0.19
DDX28-201ENST00000332395 MTCH2Q9Y6C9 303 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 SPACA6W5XKT8 324 aa16.26■□□□□ 0.19
DDX28-201ENST00000332395 FAM170BA6NMN3 283 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 THEGLP0DJG4 465 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 ACP2P11117 423 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 GLULP15104 373 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 IFNA8P32881 189 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 PPP1CAP62136 330 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 FZD2Q14332 565 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 NCF4Q15080 339 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 INAQ16352 499 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 ARHGAP11BQ3KRB8 267 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 ZNF730Q6ZMV8 503 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 CACTIN-AS1Q8N1I8 211 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 OR5T3Q8NGG3 340 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 GNPDA2Q8TDQ7 276 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 HPS1Q92902 700 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 CHCHD6Q9BRQ6 235 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 CENPOQ9BU64 300 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 ANKRD19PQ9H560 264 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 RNF167Q9H6Y7 350 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 EGLN3Q9H6Z9 239 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 SACM1LQ9NTJ5 587 aa16.25■□□□□ 0.19
DDX28-201ENST00000332395 C19orf53Q9UNZ5 99 aaPredicted RBP16.25■□□□□ 0.19
DDX28-201ENST00000332395 AP3D1O14617 1153 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 FGF17O60258 216 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 NTN1O95631 604 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 SMSP52788 366 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 RHAGQ02094 409 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 ZNF404Q494X3 552 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 SYT14P1Q58G82 188 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 MANEAQ5SRI9 462 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 SLC25A30Q5SVS4 291 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 FHL5Q5TD97 284 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 C19orf48Q6RUI8 117 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 PRICKLE2Q7Z3G6 844 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 PEX5LQ8IYB4 626 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 CSNK1A1LQ8N752 337 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 TMEM52Q8NDY8 209 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 KBTBD8Q8NFY9 601 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 DOK4Q8TEW6 326 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 SCN2AQ99250 2005 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 GPR174Q9BXC1 333 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 DSN1Q9H410 356 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 CLEC2DQ9UHP7 191 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 NTNG1Q9Y2I2 539 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 LSM2Q9Y333 95 aaKnown RBP16.24■□□□□ 0.19
DDX28-201ENST00000332395 CCRL2O00421 344 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 CYR61O00622 381 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 ARHGAP33O14559 1287 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 ATP1B1P05026 303 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 CTSEP14091 401 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 SHC2P98077 582 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 TSPAN31Q12999 210 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 PLEKHM3Q6ZWE6 761 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 ZNF438Q7Z4V0 828 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 ATCAYQ86WG3 371 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 SLC34A3Q8N130 599 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 TEX47Q8TBZ9 253 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 LRR1Q96L50 414 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 MCHR1Q99705 422 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 CACYBPQ9HB71 228 aaKnown RBP16.24■□□□□ 0.19
DDX28-201ENST00000332395 IL21RQ9HBE5 538 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 ADAP2Q9NPF8 381 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 GPR27Q9NS67 375 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 CNIH4Q9P003 139 aa16.24■□□□□ 0.19
DDX28-201ENST00000332395 OR5K3A6NET4 321 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 METTL15A6NJ78 407 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 GALR3O60755 368 aaPredicted RBP16.23■□□□□ 0.19
DDX28-201ENST00000332395 CKMT1AP12532 417 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 VSX2P58304 361 aaPredicted RBP16.23■□□□□ 0.19
DDX28-201ENST00000332395 EFNB1P98172 346 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 HHEXQ03014 270 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 C1orf61Q13536 156 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 LARS2Q15031 903 aaKnown RBP16.23■□□□□ 0.19
DDX28-201ENST00000332395 KCNJ8Q15842 424 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 SSX1Q16384 188 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 SNAPC1Q16533 368 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 TIMM50Q3ZCQ8 353 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 CCNJQ5T5M9 372 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 ZNF836Q6ZNA1 936 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 RRM2BQ7LG56 351 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 OOSP2Q86WS3 158 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 AMER2Q8N7J2 671 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 FGF11Q92914 225 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 FAM46AQ96IP4 442 aaKnown RBP16.23■□□□□ 0.19
DDX28-201ENST00000332395 DACH2Q96NX9 599 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 OPALINQ96PE5 141 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 SDF2Q99470 211 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 TAPBPLQ9BX59 468 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 MMP27Q9H306 513 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 PIGUQ9H490 435 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 CSO75390 466 aaKnown RBP16.23■□□□□ 0.19
DDX28-201ENST00000332395 GPR75O95800 540 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 OMPP47874 163 aa16.23■□□□□ 0.19
DDX28-201ENST00000332395 MLLT1Q03111 559 aaPredicted RBP16.23■□□□□ 0.19
DDX28-201ENST00000332395 SLC27A4Q6P1M0 643 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms