RNA–Protein interactions for RNA: ENST00000330949.2

SOX1-201, Transcript of SRY-box 1, humanhuman

APPRIS P1 BASIC

Gene SOX1, Length 2,842 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX1-201ENST00000330949 MT-ND4P03905 459 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 DRD5P21918 477 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 SGSHP51688 502 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 CDH11P55287 796 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 POLR2GP62487 172 aaKnown RBP eCLIP22.86■■□□□ 1.25
SOX1-201ENST00000330949 DYRK1AQ13627 763 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 ZNF791Q3KP31 576 aaPredicted RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 PDSS1Q5T2R2 415 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 METTL11BQ5VVY1 283 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 MCATQ8IVS2 390 aaKnown RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 OR6K2Q8NGY2 324 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 TRMT10AQ8TBZ6 339 aaKnown RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 TEX47Q8TBZ9 253 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 FAIM2Q9BWQ8 316 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 ZCCHC4Q9H5U6 513 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 HMX1Q9NP08 348 aaPredicted RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 GKN1Q9NS71 199 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 ACTR10Q9NZ32 417 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 CKAP5Q14008 2032 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 MCRIP1C9JLW8 97 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 CBX7O95931 251 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 BCHEP06276 602 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 GSTM3P21266 225 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 SPAM1P38567 509 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 ZNF177Q13360 481 aaPredicted RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 RBM45Q8IUH3 476 aaKnown RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 OR4K5Q8NGD3 323 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 CNOT9Q92600 299 aaKnown RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 GPR160Q9UJ42 338 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 KCNK7Q9Y2U2 307 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 Q9Y3F1 56 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 ZNF106Q9H2Y7 1883 aaKnown RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 SCN10AQ9Y5Y9 1956 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 ANXA2P2A6NMY6 339 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 GIPP09681 153 aaPredicted RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 FURINP09958 794 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 MPC1LP0DKB6 136 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 S100A11P31949 105 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 SLC6A11P48066 632 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 FGL1Q08830 312 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 CLP1Q92989 425 aaKnown RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 RRAGCQ9HB90 399 aa22.86■■□□□ 1.25
SOX1-201ENST00000330949 PURGQ9UJV8 347 aaKnown RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 NOSIPQ9Y314 301 aaKnown RBP22.86■■□□□ 1.25
SOX1-201ENST00000330949 PRR23D1E9PI22 279 aaPredicted RBP22.85■■□□□ 1.25
SOX1-201ENST00000330949 GFYI3L273 518 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 DVL2O14641 736 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 RNF13O43567 381 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 SDC3O75056 442 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 PRR23D2P0DMB1 279 aaPredicted RBP22.85■■□□□ 1.25
SOX1-201ENST00000330949 CCL23P55773 120 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 ARF5P84085 180 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 DGCR2P98153 550 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 HLXQ14774 488 aaPredicted RBP22.85■■□□□ 1.25
SOX1-201ENST00000330949 ENTPD8Q5MY95 495 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 THOC6Q86W42 341 aaKnown RBP22.85■■□□□ 1.25
SOX1-201ENST00000330949 KLBQ86Z14 1044 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 LRRC56Q8IYG6 542 aaPredicted RBP22.85■■□□□ 1.25
SOX1-201ENST00000330949 SPICQ8N5J4 248 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 OR4F15Q8NGB8 312 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 SLC38A5Q8WUX1 472 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 SORBS1Q9BX66 1292 aaKnown RBP22.85■■□□□ 1.25
SOX1-201ENST00000330949 WDR26Q9H7D7 661 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 NPDC1Q9NQX5 325 aaPredicted RBP22.85■■□□□ 1.25
SOX1-201ENST00000330949 NKIRAS2Q9NYR9 191 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 LRRN3E7EW58 273 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 URODP06132 367 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 ATP5A1P25705 553 aaKnown RBP22.85■■□□□ 1.25
SOX1-201ENST00000330949 RAP2BP61225 183 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 PDE7AQ13946 482 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 RNASE12Q5GAN4 147 aaKnown RBP22.85■■□□□ 1.25
SOX1-201ENST00000330949 MRPS31Q92665 395 aaKnown RBP22.85■■□□□ 1.25
SOX1-201ENST00000330949 SLC19A3Q9BZV2 496 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 LRRN3Q9H3W5 708 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 FN3KQ9H479 309 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 MGAT4CQ9UBM8 478 aa22.85■■□□□ 1.25
SOX1-201ENST00000330949 A0A1W2PRB8 838 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 ITGA10O75578 1167 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 GJB5O95377 273 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 CLDN7O95471 211 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 TYRP14679 529 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 RPL17P18621 184 aaKnown RBP22.84■■□□□ 1.25
SOX1-201ENST00000330949 PIN1Q13526 163 aaPredicted RBP22.84■■□□□ 1.25
SOX1-201ENST00000330949 SFRP5Q5T4F7 317 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 ADNP2Q6IQ32 1131 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 C1orf94Q6P1W5 598 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 IQCHQ86VS3 1027 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 OR1S1Q8NH92 325 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 MRPS24Q96EL2 167 aaKnown RBP22.84■■□□□ 1.25
SOX1-201ENST00000330949 MARK1Q9P0L2 795 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 LHX3Q9UBR4 397 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 NDRG3Q9UGV2 375 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 PRRC2BQ5JSZ5 2229 aaKnown RBP22.84■■□□□ 1.25
SOX1-201ENST00000330949 TRABD2BA6NFA1 517 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 AGAP14A8MT82 685 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 RNF144AP50876 292 aaPredicted RBP22.84■■□□□ 1.25
SOX1-201ENST00000330949 RHOAP61586 193 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 BDH1Q02338 343 aa22.84■■□□□ 1.25
SOX1-201ENST00000330949 SEMG2Q02383 582 aa22.84■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms