RNA–Protein interactions for RNA: ENST00000329231.8

ATPAF1-201, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2 BASIC

Gene ATPAF1, Length 1,241 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-201ENST00000329231 GABRA3P34903 492 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 GCKP35557 465 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 PRKAG1P54619 331 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 CRYZQ08257 329 aaKnown RBP25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 EIPR1Q53HC9 387 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 NHSL2Q5HYW2 709 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 WIPI1Q5MNZ9 446 aaPredicted RBP25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 CDRT4Q8N9R6 151 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 OR10Q1Q8NGQ4 319 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 MARVELD3Q96A59 401 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 MS4A4EQ96PG1 132 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 TIMP4Q99727 224 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 HAO1Q9UJM8 370 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 SLC6A5Q9Y345 797 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 NBPF19A0A087WUL8 3843 aa25.18■■□□□ 1.62
ATPAF1-201ENST00000329231 MAST4O15021 2626 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 A0A1W2PRB8 838 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 KCNH1O95259 989 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 IL33O95760 270 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 GLI4P10075 376 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 LAMP1P11279 417 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 EFNA1P20827 205 aaPredicted RBP25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 EVI2BP34910 448 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 PRR5P85299 388 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 VASNQ6EMK4 673 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 PM20D2Q8IYS1 436 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 ULK2Q8IYT8 1036 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 MGARPQ8TDB4 240 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 GPR151Q8TDV0 419 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 HOXB13Q92826 284 aaPredicted RBP25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 ATP6V1G3Q96LB4 118 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 PPP1R36Q96LQ0 422 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 ASIC5Q9NY37 505 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 ABCG2Q9UNQ0 655 aa25.17■■□□□ 1.62
ATPAF1-201ENST00000329231 AHRRA9YTQ3 701 aa25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 FAM47E-STBD1D6RA91 191 aa25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 G6PDP11413 515 aa25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 GAS1P54826 345 aa25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 BST1Q10588 318 aa25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 YRDCQ86U90 279 aaKnown RBP25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 KRTCAP2Q8N6L1 136 aa25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 LILRB4Q8NHJ6 448 aa25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 ABTB1Q969K4 478 aaPredicted RBP25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 COQ8BQ96D53 544 aa25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 SH3GL2Q99962 352 aa25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 OR2B2Q9GZK3 357 aa25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 AKTIPQ9H8T0 292 aa25.16■■□□□ 1.62
ATPAF1-201ENST00000329231 PHF3Q92576 2039 aaKnown RBP25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 GIMAP1-GIMAP5A0A087WTJ2 511 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 NKX2-2O95096 273 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 BMP7P18075 431 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 MAP3K8P41279 467 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 RFX3P48380 749 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 CLK3P49761 638 aaKnown RBP25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 SF3B4Q15427 424 aaKnown RBP eCLIP25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 ZCCHC12Q6PEW1 402 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 CCDC71Q8IV32 467 aaPredicted RBP25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 RIMKLAQ8IXN7 391 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 GOLGA6L1Q8N7Z2 621 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 OR14L1PQ8NHC6 308 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 OR5P2Q8WZ92 322 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 SLC9A6Q92581 669 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 GIMAP5Q96F15 307 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 UGT2B28Q9BY64 529 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 PRDM14Q9GZV8 571 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 SDHAF3Q9NRP4 125 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 FAM120CQ9NX05 1096 aaKnown RBP25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 FREM3P0C091 2139 aa25.15■■□□□ 1.62
ATPAF1-201ENST00000329231 GXYLT2A0PJZ3 443 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 SCO2O43819 266 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 FADS1O60427 444 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 ACTL6AO96019 429 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 COX6B1P14854 86 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 SRD5A2P31213 254 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 CLDN8P56748 225 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 C21orf58P58505 322 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 LSM12Q3MHD2 195 aaKnown RBP25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 TTMPQ5BVD1 217 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 MFSD12Q6NUT3 480 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 PIK3R3Q92569 461 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 FAM120BQ96EK7 910 aaKnown RBP25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 RMND5BQ96G75 393 aaPredicted RBP25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 BHLHE41Q9C0J9 482 aaPredicted RBP25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 SIRT3Q9NTG7 399 aaPredicted RBP25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 ZCCHC3Q9NUD5 404 aaKnown RBP25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 PPP4R1LQ9P1A2 415 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 FBXL2Q9UKC9 423 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 SNX8Q9Y5X2 465 aa25.14■■□□□ 1.62
ATPAF1-201ENST00000329231 ZFP36L2P47974 494 aaKnown RBP25.13■■□□□ 1.61
ATPAF1-201ENST00000329231 PRIM2P49643 509 aa25.13■■□□□ 1.61
ATPAF1-201ENST00000329231 OR5M10Q6IEU7 315 aa25.13■■□□□ 1.61
ATPAF1-201ENST00000329231 LRRC34Q8IZ02 419 aa25.13■■□□□ 1.61
ATPAF1-201ENST00000329231 OR4K17Q8NGC6 315 aa25.13■■□□□ 1.61
ATPAF1-201ENST00000329231 RAB3IL1Q8TBN0 382 aa25.13■■□□□ 1.61
ATPAF1-201ENST00000329231 NUF2Q9BZD4 464 aa25.13■■□□□ 1.61
ATPAF1-201ENST00000329231 TAS2R10Q9NYW0 307 aa25.13■■□□□ 1.61
ATPAF1-201ENST00000329231 DKKL1Q9UK85 242 aa25.13■■□□□ 1.61
ATPAF1-201ENST00000329231 CAMK2AQ9UQM7 478 aa25.13■■□□□ 1.61
ATPAF1-201ENST00000329231 MRPS18CQ9Y3D5 142 aaKnown RBP25.13■■□□□ 1.61
ATPAF1-201ENST00000329231 C19orf84I3L1E1 186 aa25.12■■□□□ 1.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms