RNA–Protein interactions for RNA: ENST00000324444.7

SYNE4-201, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

APPRIS P3 TSL 5 BASIC

Gene SYNE4, Length 1,354 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-201ENST00000324444 ATP6V1C1P21283 382 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 AQP1P29972 269 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 LCN1P31025 176 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 SSTR4P31391 388 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 GABRA3P34903 492 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 PPICP45877 212 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 SLC37A1P57057 533 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 SYPL1Q16563 259 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 CYP27C1Q4G0S4 372 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 IFI44LQ53G44 452 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 SFT2D3Q587I9 215 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 CCDC81Q6ZN84 652 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 PEX5LQ8IYB4 626 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 NLGN4XQ8N0W4 816 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 C17orf47Q8NEP4 570 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 NLGN4YQ8NFZ3 816 aaPredicted RBP16.73■□□□□ 0.27
SYNE4-201ENST00000324444 PROX1Q92786 737 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 CDS1Q92903 461 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 CCNL2Q96S94 520 aaPredicted RBP16.73■□□□□ 0.27
SYNE4-201ENST00000324444 ANKRA2Q9H9E1 313 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 PPIEQ9UNP9 301 aaKnown RBP16.73■□□□□ 0.27
SYNE4-201ENST00000324444 PTRH2Q9Y3E5 179 aaKnown RBP16.73■□□□□ 0.27
SYNE4-201ENST00000324444 WDR45Q9Y484 360 aa16.73■□□□□ 0.27
SYNE4-201ENST00000324444 GPC6Q9Y625 555 aaPredicted RBP16.73■□□□□ 0.27
SYNE4-201ENST00000324444 A8MUA0 341 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 K7ENP7 123 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 H6PDO95479 791 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 DDAH2O95865 285 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 LDLRP01130 860 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 PRB1P04280 392 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 ALPPP05187 535 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 DRD5P21918 477 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 DCST2Q5T1A1 773 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 LCN10Q6JVE6 187 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 INO80CQ6PI98 192 aaPredicted RBP16.72■□□□□ 0.27
SYNE4-201ENST00000324444 ANKFN1Q8N957 763 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 B3GNT7Q8NFL0 401 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 OR8K3Q8NH51 312 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 C16orf52Q8NHV5 167 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 ZNF721Q8TF20 911 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 SNRNP27Q8WVK2 155 aaKnown RBP16.72■□□□□ 0.27
SYNE4-201ENST00000324444 GEMIN6Q8WXD5 167 aaKnown RBP16.72■□□□□ 0.27
SYNE4-201ENST00000324444 SLCO4A1Q96BD0 722 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 VMP1Q96GC9 406 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 TPD52L3Q96J77 140 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 COL21A1Q96P44 957 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 BTBD9Q96Q07 612 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 SDF2Q99470 211 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 IL1RAPQ9NPH3 570 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 C8orf4Q9NR00 106 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 SLC13A4Q9UKG4 626 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 OR10H1Q9Y4A9 318 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 CCDC88CQ9P219 2028 aa16.72■□□□□ 0.27
SYNE4-201ENST00000324444 LOC102723996A0A087X1L8 192 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 STMND1H3BQB6 276 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 ERVH48-1M5A8F1 160 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 ACOX3O15254 700 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 MFN2O95140 757 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 FABP3P05413 133 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 TCN2P20062 427 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 PSG6Q00889 435 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 KCNC4Q03721 635 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 LARS2Q15031 903 aaKnown RBP16.71■□□□□ 0.27
SYNE4-201ENST00000324444 PAPD4Q6PIY7 484 aaKnown RBP16.71■□□□□ 0.27
SYNE4-201ENST00000324444 PCSK4Q6UW60 755 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 ENPP6Q6UWR7 440 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 SHISA6Q6ZSJ9 500 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 PIWIL3Q7Z3Z3 882 aaKnown RBP16.71■□□□□ 0.27
SYNE4-201ENST00000324444 OR5L2Q8NGL0 311 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 CENPNQ96H22 339 aaPredicted RBP16.71■□□□□ 0.27
SYNE4-201ENST00000324444 LCORQ96JN0 433 aaPredicted RBP16.71■□□□□ 0.27
SYNE4-201ENST00000324444 HSH2DQ96JZ2 352 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 ZNF347Q96SE7 839 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 ZNF350Q9GZX5 532 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 HOXD1Q9GZZ0 328 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 SAP130Q9H0E3 1048 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 VCXQ9H320 206 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 AKIRIN1Q9H9L7 192 aaPredicted RBP16.71■□□□□ 0.27
SYNE4-201ENST00000324444 KLHL28Q9NXS3 571 aa16.71■□□□□ 0.27
SYNE4-201ENST00000324444 NKX1-2Q9UD57 310 aaPredicted RBP16.71■□□□□ 0.27
SYNE4-201ENST00000324444 FARSAQ9Y285 508 aaKnown RBP16.71■□□□□ 0.27
SYNE4-201ENST00000324444 GPR55Q9Y2T6 319 aaPredicted RBP16.71■□□□□ 0.27
SYNE4-201ENST00000324444 DSPPQ9NZW4 1301 aa16.7■□□□□ 0.26
SYNE4-201ENST00000324444 C2orf92A0A1B0GVN3 265 aa16.7■□□□□ 0.26
SYNE4-201ENST00000324444 FRG2CA6NGY1 282 aa16.7■□□□□ 0.26
SYNE4-201ENST00000324444 IQCJ-SCHIP1C9J366 451 aaPredicted RBP16.7■□□□□ 0.26
SYNE4-201ENST00000324444 CASQ2O14958 399 aaPredicted RBP16.7■□□□□ 0.26
SYNE4-201ENST00000324444 CNOT3O75175 753 aaKnown RBP16.7■□□□□ 0.26
SYNE4-201ENST00000324444 GCM2O75603 506 aaPredicted RBP16.7■□□□□ 0.26
SYNE4-201ENST00000324444 DBIP07108 87 aaKnown RBP16.7■□□□□ 0.26
SYNE4-201ENST00000324444 THBS1P07996 1170 aa16.7■□□□□ 0.26
SYNE4-201ENST00000324444 CHRM4P08173 479 aa16.7■□□□□ 0.26
SYNE4-201ENST00000324444 PIGAP37287 484 aa16.7■□□□□ 0.26
SYNE4-201ENST00000324444 MAGEA2P43356 314 aa16.7■□□□□ 0.26
SYNE4-201ENST00000324444 EFNA3P52797 238 aa16.7■□□□□ 0.26
SYNE4-201ENST00000324444 SRSF6Q13247 344 aaKnown RBP16.7■□□□□ 0.26
SYNE4-201ENST00000324444 GK3PQ14409 553 aa16.7■□□□□ 0.26
SYNE4-201ENST00000324444 SSPNQ14714 243 aa16.7■□□□□ 0.26
SYNE4-201ENST00000324444 EXT1Q16394 746 aa16.7■□□□□ 0.26
SYNE4-201ENST00000324444 DECR1Q16698 335 aa16.7■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 652.2 ms