RNA–Protein interactions for RNA: ENST00000323959.8

CSTF3-201, Transcript of cleavage stimulation factor subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF3, Length 2,797 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF3-201ENST00000323959 PM20D2Q8IYS1 436 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 PPP1R14AQ96A00 147 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 MVB12AQ96EY5 273 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 BTBD9Q96Q07 612 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 EFCAB11Q9BUY7 163 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 WDR55Q9H6Y2 383 aaPredicted RBP6.03□□□□□ -1.44
CSTF3-201ENST00000323959 CALHM2Q9HA72 323 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 WWOXQ9NZC7 414 aa6.03□□□□□ -1.44
CSTF3-201ENST00000323959 TRGV5A0A0B4J1U4 118 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 SLC22A31A6NKX4 558 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 TMEM233B4DJY2 109 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 HCRTR1O43613 425 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 IFI6P09912 130 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 APEHP13798 732 aaKnown RBP6.02□□□□□ -1.45
CSTF3-201ENST00000323959 IL1RNP18510 177 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 FOXA1P55317 472 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 STX1BP61266 288 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 UBA52P62987 128 aaKnown RBP6.02□□□□□ -1.45
CSTF3-201ENST00000323959 SYTL3Q4VX76 610 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 GK5Q6ZS86 529 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 NATD1Q8N6N6 113 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 PCYOX1LQ8NBM8 494 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 ABHD11Q8NFV4 315 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 OR2T11Q8NH01 316 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 FAM168AQ92567 244 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 ZUFSPQ96AP4 578 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 C12orf66Q96MD2 445 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 TRAF4Q9BUZ4 470 aaPredicted RBP6.02□□□□□ -1.45
CSTF3-201ENST00000323959 CDCP1Q9H5V8 836 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 ELOVL5Q9NYP7 299 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 A6NHS1 94 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 E9PBE3 544 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 NDUFS8O00217 210 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 NRP2O60462 931 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 ABCB7O75027 752 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 PEX11AO75192 247 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 OR4F21O95013 312 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 SEMA3DO95025 777 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 TGFAP01135 160 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 CTSBP07858 339 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 UGT2B7P16662 529 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 GNAZP19086 355 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 CD79BP40259 229 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 BLMHQ13867 455 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 ATP6AP1LQ52LC2 224 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 LRIF1Q5T3J3 769 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 ZNF468Q5VIY5 522 aaPredicted RBP6.02□□□□□ -1.45
CSTF3-201ENST00000323959 ZFP1Q6P2D0 407 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 AGTRAPQ6RW13 159 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 THOC6Q86W42 341 aaKnown RBP6.02□□□□□ -1.45
CSTF3-201ENST00000323959 GALNT12Q8IXK2 581 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 RIMKLAQ8IXN7 391 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 OR2M7Q8NG81 312 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 OR52B6Q8NGF0 335 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 AKAP1Q92667 903 aaKnown RBP eCLIP6.02□□□□□ -1.45
CSTF3-201ENST00000323959 RAD51AP1Q96B01 352 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 MTERF3Q96E29 417 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 DTNBP1Q96EV8 351 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 PKP4Q99569 1192 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 SPATA9Q9BWV2 254 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 MRPL1Q9BYD6 325 aaKnown RBP6.02□□□□□ -1.45
CSTF3-201ENST00000323959 TTTY12Q9BZ98 90 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 METTL17Q9H7H0 456 aaPredicted RBP6.02□□□□□ -1.45
CSTF3-201ENST00000323959 RNPEPL1Q9HAU8 725 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 SEMA4BQ9NPR2 832 aaPredicted RBP6.02□□□□□ -1.45
CSTF3-201ENST00000323959 STX18Q9P2W9 335 aaKnown RBP6.02□□□□□ -1.45
CSTF3-201ENST00000323959 ADAM29Q9UKF5 820 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 PCDHGA11Q9Y5H2 935 aa6.02□□□□□ -1.45
CSTF3-201ENST00000323959 PABPN1LA6NDY0 278 aaKnown RBP6.01□□□□□ -1.45
CSTF3-201ENST00000323959 FBP2O00757 339 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 CASQ2O14958 399 aaPredicted RBP6.01□□□□□ -1.45
CSTF3-201ENST00000323959 SMAD9O15198 467 aaKnown RBP6.01□□□□□ -1.45
CSTF3-201ENST00000323959 SEC24DO94855 1032 aaPredicted RBP6.01□□□□□ -1.45
CSTF3-201ENST00000323959 IL6P05231 212 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 PGM1P36871 562 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 HSPA7P48741 367 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 CLDN8P56748 225 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 EEFSECP57772 596 aaKnown RBP6.01□□□□□ -1.45
CSTF3-201ENST00000323959 ABATP80404 500 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 BNIP2Q12982 314 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 KRT33BQ14525 404 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 SLC10A1Q14973 349 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 MALRD1Q5VYJ5 2156 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 REP15Q6BDI9 236 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 CLEC6AQ6EIG7 209 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 CAPN13Q6MZZ7 669 aaPredicted RBP6.01□□□□□ -1.45
CSTF3-201ENST00000323959 SLCO4C1Q6ZQN7 724 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 PRSS58Q8IYP2 241 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 ADGRF3Q8IZF5 1079 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 OR8J3Q8NGG0 315 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 METTL6Q8TCB7 284 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 FBXW5Q969U6 566 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 ASB9Q96DX5 294 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 CCDC115Q96NT0 180 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 PAPOLBQ9NRJ5 636 aaKnown RBP6.01□□□□□ -1.45
CSTF3-201ENST00000323959 GID8Q9NWU2 228 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 NMRK1Q9NWW6 199 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 C1orf109Q9NX04 203 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 SLC7A8Q9UHI5 535 aa6.01□□□□□ -1.45
CSTF3-201ENST00000323959 LEF1Q9UJU2 399 aaPredicted RBP6.01□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 46.8 ms