RNA–Protein interactions for RNA: ENST00000321358.11

YBX1-201, Transcript of Y-box binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene YBX1, Length 1,514 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX1-201ENST00000321358 ABCD2Q9UBJ2 740 aa19.51■□□□□ 0.71
YBX1-201ENST00000321358 PKD1L2Q7Z442 2459 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 NME4O00746 187 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 TP53I11O14683 189 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 PPM1BO75688 479 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 NADKO95544 446 aaPredicted RBP19.5■□□□□ 0.71
YBX1-201ENST00000321358 IL33O95760 270 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 NUDT7P0C024 238 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 LCN1P31025 176 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 HLCSP50747 726 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 PNLIPRP2P54317 469 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 POLE2P56282 527 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 RPP38P78345 283 aaKnown RBP19.5■□□□□ 0.71
YBX1-201ENST00000321358 CDK6Q00534 326 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 SPATS1Q496A3 300 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 CCNJQ5T5M9 372 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 HEPHL1Q6MZM0 1159 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 SLC30A8Q8IWU4 369 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 FAM13CQ8NE31 585 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 SLC38A5Q8WUX1 472 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 EFHD2Q96C19 240 aaPredicted RBP19.5■□□□□ 0.71
YBX1-201ENST00000321358 SLC7A6OSQ96CW6 309 aaPredicted RBP19.5■□□□□ 0.71
YBX1-201ENST00000321358 REXO5Q96IC2 774 aaKnown RBP19.5■□□□□ 0.71
YBX1-201ENST00000321358 SDF2Q99470 211 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 CACYBPQ9HB71 228 aaKnown RBP19.5■□□□□ 0.71
YBX1-201ENST00000321358 POLE3Q9NRF9 147 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 PRPF19Q9UMS4 504 aaKnown RBP19.5■□□□□ 0.71
YBX1-201ENST00000321358 ZNF451Q9Y4E5 1061 aa19.5■□□□□ 0.71
YBX1-201ENST00000321358 SEC23IPQ9Y6Y8 1000 aaKnown RBP19.5■□□□□ 0.71
YBX1-201ENST00000321358 OR6C70A6NIJ9 312 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 OR6B1O95007 311 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 BCHEP06276 602 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 TFPTP0C1Z6 253 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 ARG2P78540 354 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 SYPL1Q16563 259 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 CPEB4Q17RY0 729 aaKnown RBP eCLIP19.49■□□□□ 0.71
YBX1-201ENST00000321358 REEP3Q6NUK4 255 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 NUP54Q7Z3B4 507 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 OR5M3Q8NGP4 307 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 FAM110BQ8TC76 370 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 MAL2Q969L2 176 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 TMCO6Q96DC7 493 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 SGCZQ96LD1 299 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 ZNF583Q96ND8 569 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 SMAD5Q99717 465 aaKnown RBP19.49■□□□□ 0.71
YBX1-201ENST00000321358 KCTD14Q9BQ13 255 aaPredicted RBP19.49■□□□□ 0.71
YBX1-201ENST00000321358 PRORYQ9H606 182 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 ANGPT4Q9Y264 503 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 WDR45Q9Y484 360 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 PCDHGB7Q9Y5F8 929 aa19.49■□□□□ 0.71
YBX1-201ENST00000321358 PTPRQQ9UMZ3 2332 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 FAM220BPB1ANY3 271 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 GMNNO75496 209 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 WDPCPO95876 746 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 ARAFP10398 606 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 HPGDP15428 266 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 SCARB2Q14108 478 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 ZSCAN26Q16670 478 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 FLYWCH1Q4VC44 716 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 INTS11Q5TA45 600 aaKnown RBP19.48■□□□□ 0.71
YBX1-201ENST00000321358 LRRC74BQ6ZQY2 392 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 NET1Q7Z628 596 aaPredicted RBP19.48■□□□□ 0.71
YBX1-201ENST00000321358 GALNT10Q86SR1 603 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 CALHM3Q86XJ0 350 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 CYP4Z2PQ8N1L4 340 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 C10orf111Q8N326 155 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 ANKFN1Q8N957 763 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 NFKBIDQ8NI38 313 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 MCUR1Q96AQ8 359 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 THTPAQ9BU02 230 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 HOXD1Q9GZZ0 328 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 RNF32Q9H0A6 362 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 ANKRD10Q9NXR5 420 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 ZFHX4Q86UP3 3567 aa19.48■□□□□ 0.71
YBX1-201ENST00000321358 ELOVL7A1L3X0 281 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 GSTA4O15217 222 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 TSPAN2O60636 221 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 ZNF354AO60765 605 aaPredicted RBP19.47■□□□□ 0.71
YBX1-201ENST00000321358 DNAJC8O75937 253 aaPredicted RBP19.47■□□□□ 0.71
YBX1-201ENST00000321358 H6PDO95479 791 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 CLK3P49761 638 aaKnown RBP19.47■□□□□ 0.71
YBX1-201ENST00000321358 ADRM1Q16186 407 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 NTRK2Q16620 822 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 VMACQ2NL98 169 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 ZNF791Q3KP31 576 aaPredicted RBP19.47■□□□□ 0.71
YBX1-201ENST00000321358 PRAMEF8Q5VWM4 474 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 PRAMEF7Q5VXH5 474 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 C19orf48Q6RUI8 117 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 RTL4Q6ZR62 310 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 YTHDF3Q7Z739 585 aaKnown RBP19.47■□□□□ 0.71
YBX1-201ENST00000321358 HIPK4Q8NE63 616 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 TTC9Q92623 222 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 HAS2Q92819 552 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 PMM1Q92871 262 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 TMEM19Q96HH6 336 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 MTHFD2LQ9H903 347 aaPredicted RBP19.47■□□□□ 0.71
YBX1-201ENST00000321358 LRFN1Q9P244 771 aa19.47■□□□□ 0.71
YBX1-201ENST00000321358 A0A0G2JPF8 293 aa19.46■□□□□ 0.71
YBX1-201ENST00000321358 OR5H15A6NDH6 313 aa19.46■□□□□ 0.71
YBX1-201ENST00000321358 HNRNPCL2B2RXH8 293 aa19.46■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms