RNA–Protein interactions for RNA: ENST00000320578.2

RAB39A-201, Transcript of RAB39A, member RAS oncogene family, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB39A, Length 1,830 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB39A-201ENST00000320578 ONECUT2O95948 504 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 NID1P14543 1247 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 IL7RP16871 459 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 RORAP35398 523 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 OR1D4P47884 311 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 ALDH3B2P48448 385 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 IL1RL1Q01638 556 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 PIN1Q13526 163 aaPredicted RBP16.58■□□□□ 0.24
RAB39A-201ENST00000320578 ZNF267Q14586 743 aaPredicted RBP16.58■□□□□ 0.24
RAB39A-201ENST00000320578 CD300LDQ6UXZ3 194 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 ZNF615Q8N8J6 731 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 PIK3R3Q92569 461 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 PTCHD1Q96NR3 888 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 NIPSNAP1Q9BPW8 284 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 TGIF2Q9GZN2 237 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 RHCGQ9UBD6 479 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 DHCR7Q9UBM7 475 aaKnown RBP16.58■□□□□ 0.24
RAB39A-201ENST00000320578 ATXN7L1Q9ULK2 861 aaPredicted RBP16.58■□□□□ 0.24
RAB39A-201ENST00000320578 PCDHGA5Q9Y5G8 931 aa16.58■□□□□ 0.24
RAB39A-201ENST00000320578 DYRK3O43781 588 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 GASTP01350 101 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 ATP6V1B1P15313 513 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 CRHBPP24387 322 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 CSNK2BP67870 215 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 TEKQ02763 1124 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 COX10Q12887 443 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 CDK5R2Q13319 367 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 BORAQ6PGQ7 559 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 ISLR2Q6UXK2 745 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 ZNF836Q6ZNA1 936 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 AQP11Q8NBQ7 271 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 OR9Q2Q8NGE9 314 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 IFI44Q8TCB0 444 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 SLC7A13Q8TCU3 470 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 SLC35B4Q969S0 331 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 OR10A5Q9H207 317 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 MAN2C1Q9NTJ4 1040 aa16.57■□□□□ 0.24
RAB39A-201ENST00000320578 FMO6PO60774 539 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 OR5F1O95221 314 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 IFNA16P05015 189 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 ELK4P28324 431 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 SSTR4P31391 388 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 GGT2P36268 569 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 RHAGQ02094 409 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 ST3GAL3Q11203 375 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 TRA2AQ13595 282 aaKnown RBP eCLIP16.56■□□□□ 0.24
RAB39A-201ENST00000320578 COL9A2Q14055 689 aaPredicted RBP16.56■□□□□ 0.24
RAB39A-201ENST00000320578 CTU2Q2VPK5 515 aaKnown RBP16.56■□□□□ 0.24
RAB39A-201ENST00000320578 FGD3Q5JSP0 725 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 DBX2Q6ZNG2 339 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 CLIP4Q8N3C7 705 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 PLPP5Q8NEB5 264 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 DOK4Q8TEW6 326 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 DIO2Q92813 273 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 Q9N2J8 555 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 CFL2Q9Y281 166 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 PCDHGA10Q9Y5H3 936 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 CCDC88CQ9P219 2028 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 IGLV3-12A0A075B6K2 115 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 TCRBV16S1A1N1A0A5B0 115 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 GXYLT2A0PJZ3 443 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 NTN3O00634 580 aaPredicted RBP16.56■□□□□ 0.24
RAB39A-201ENST00000320578 AP3D1O14617 1153 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 HBQ1P09105 142 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 FUT4P22083 530 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 PSMD4P55036 377 aaKnown RBP16.56■□□□□ 0.24
RAB39A-201ENST00000320578 RGS8P57771 180 aaPredicted RBP16.56■□□□□ 0.24
RAB39A-201ENST00000320578 DAB2P98082 770 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 IL5RAQ01344 420 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 TRAM2Q15035 370 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 SEC23BQ15437 767 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 ELAVL1Q15717 326 aaKnown RBP16.56■□□□□ 0.24
RAB39A-201ENST00000320578 GPR68Q15743 365 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 MEP1AQ16819 746 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 CCNJQ5T5M9 372 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 ARHGAP40Q5TG30 622 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 LAIR2Q6ISS4 152 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 ZNF773Q6PK81 442 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 PTPMT1Q8WUK0 201 aaPredicted RBP16.56■□□□□ 0.24
RAB39A-201ENST00000320578 ZDHHC19Q8WVZ1 309 aaPredicted RBP16.56■□□□□ 0.24
RAB39A-201ENST00000320578 SLC38A4Q969I6 547 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 G6PC3Q9BUM1 346 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 SIDT1Q9NXL6 827 aaKnown RBP16.56■□□□□ 0.24
RAB39A-201ENST00000320578 ERVK-19Q9WJR5 959 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 GPR55Q9Y2T6 319 aaPredicted RBP16.56■□□□□ 0.24
RAB39A-201ENST00000320578 PCDHGA6Q9Y5G7 932 aa16.56■□□□□ 0.24
RAB39A-201ENST00000320578 ASXL3Q9C0F0 2248 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 C17orf105B2RV13 164 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 TPST2O60704 377 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 MRPS14O60783 128 aaKnown RBP16.55■□□□□ 0.24
RAB39A-201ENST00000320578 CYP7B1O75881 506 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 CLPSP04118 112 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 CCNYL3P0C7X3 344 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 CYP4B1P13584 511 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 TNNI3P19429 210 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 EPHA2P29317 976 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 AVPR2P30518 371 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 TAS2R41P59536 307 aa16.55■□□□□ 0.24
RAB39A-201ENST00000320578 ALDH6A1Q02252 535 aaKnown RBP16.55■□□□□ 0.24
RAB39A-201ENST00000320578 ILKQ13418 452 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms