RNA–Protein interactions for RNA: ENST00000320081.9

CLIP4-201, Transcript of CAP-Gly domain containing linker protein family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP4, Length 4,293 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP4-201ENST00000320081 CPXM2Q8N436 756 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 CPEB1Q9BZB8 566 aaKnown RBP15.54■□□□□ 0.08
CLIP4-201ENST00000320081 TMEM168Q9H0V1 697 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 P2RY12Q9H244 342 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 DPAGT1Q9H3H5 408 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 STUB1Q9UNE7 303 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 GRIP1Q9Y3R0 1128 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 A0A1W2PQ09 198 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 PRODHO43272 600 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 DOK2O60496 412 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 AGR2O95994 175 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 HTR1AP08908 422 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 HNRNPA1P09651 372 aaKnown RBP eCLIP15.54■□□□□ 0.08
CLIP4-201ENST00000320081 ATF4P18848 351 aaPredicted RBP15.54■□□□□ 0.08
CLIP4-201ENST00000320081 HIST1H1TP22492 207 aaPredicted RBP15.54■□□□□ 0.08
CLIP4-201ENST00000320081 F8A1P23610 371 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 ITGB7P26010 798 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 CCR2P41597 374 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 PYCR3Q53H96 274 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 CEP76Q8TAP6 659 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 RIT1Q92963 219 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 DIABLOQ9NR28 239 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 CCDC59Q9P031 241 aaKnown RBP15.54■□□□□ 0.08
CLIP4-201ENST00000320081 LIPT1Q9Y234 373 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 UTRNP46939 3433 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 KIAA1217Q5T5P2 1943 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 TSPAN12O95859 305 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 TNFSF8P32971 234 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 HOXD12P35452 270 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 GALK2Q01415 458 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 RPA4Q13156 261 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 SLC14A1Q13336 389 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 CNIH2Q6PI25 160 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 DGLUCYQ7Z3D6 616 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 LINC00471Q8N535 108 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 C17orf50Q8WW18 174 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 NRTNQ99748 197 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 IFT46Q9NQC8 304 aa15.54■□□□□ 0.08
CLIP4-201ENST00000320081 A6NL46 340 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 PRRT4C9JH25 899 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 ZNF432O94892 652 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 CDK1P06493 297 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 CLEC2LP0C7M8 214 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 PEPDP12955 493 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 LRRC26Q2I0M4 334 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 OR13F1Q8NGS4 319 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 ADAMTS19Q8TE59 1207 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 RFT1Q96AA3 541 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 LMF1Q96S06 567 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 SYNPO2LQ9H987 977 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 VNN3Q9NY84 501 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 NDUFAF4Q9P032 175 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 EXOSC1Q9Y3B2 195 aaKnown RBP15.53■□□□□ 0.08
CLIP4-201ENST00000320081 LOC102723532A0A0G2JNH3 316 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 ISPDA4D126 451 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 ECDO95905 644 aaPredicted RBP15.53■□□□□ 0.08
CLIP4-201ENST00000320081 CD3GP09693 182 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 SNTB2Q13425 540 aaKnown RBP15.53■□□□□ 0.08
CLIP4-201ENST00000320081 KCTD9Q7L273 389 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 TRIM46Q7Z4K8 759 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 NRARPQ7Z6K4 114 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 PATE1Q8WXA2 126 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 PCDHGB7Q9Y5F8 929 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 ZSCAN5BA6NJL1 495 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 GPR89AB7ZAQ6 455 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 HYAL3O43820 417 aaPredicted RBP15.53■□□□□ 0.08
CLIP4-201ENST00000320081 COQ9O75208 318 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 GPR89BP0CG08 455 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 GSTT2P0CG29 244 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 GSTT2BP0CG30 244 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 DRD2P14416 443 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 MAT1AQ00266 395 aaKnown RBP15.53■□□□□ 0.08
CLIP4-201ENST00000320081 NKG7Q16617 165 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 TMEM44Q2T9K0 475 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 HSD17B12Q53GQ0 312 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 ZCCHC12Q6PEW1 402 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 ENTHD1Q8IYW4 607 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 OR2L3Q8NG85 312 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 RPLP0P6Q8NHW5 317 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 SETD6Q8TBK2 473 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 LRRC20Q8TCA0 184 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 SPRYD4Q8WW59 207 aaPredicted RBP15.53■□□□□ 0.08
CLIP4-201ENST00000320081 GAS2L1Q99501 681 aaPredicted RBP15.53■□□□□ 0.08
CLIP4-201ENST00000320081 APOOQ9BUR5 198 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 CACNG6Q9BXT2 260 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 RETREG1Q9H6L5 497 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 SFXN1Q9H9B4 322 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 BRF2Q9HAW0 419 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 PLEKHA6Q9Y2H5 1048 aa15.53■□□□□ 0.08
CLIP4-201ENST00000320081 ARHGAP33O14559 1287 aa15.52■□□□□ 0.08
CLIP4-201ENST00000320081 JRKO75564 520 aa15.52■□□□□ 0.08
CLIP4-201ENST00000320081 OR2B3O76000 313 aa15.52■□□□□ 0.08
CLIP4-201ENST00000320081 ABLIM3O94929 683 aa15.52■□□□□ 0.08
CLIP4-201ENST00000320081 AP3S2P59780 193 aa15.52■□□□□ 0.08
CLIP4-201ENST00000320081 Q6ZSR6 202 aa15.52■□□□□ 0.08
CLIP4-201ENST00000320081 SLC29A4Q7RTT9 530 aa15.52■□□□□ 0.08
CLIP4-201ENST00000320081 GALNT7Q86SF2 657 aa15.52■□□□□ 0.08
CLIP4-201ENST00000320081 ZNF527Q8NB42 609 aa15.52■□□□□ 0.08
CLIP4-201ENST00000320081 OR6T1Q8NGN1 323 aa15.52■□□□□ 0.08
CLIP4-201ENST00000320081 OR9A4Q8NGU2 314 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms