RNA–Protein interactions for RNA: ENST00000319234.4

SHISA3-201, Transcript of shisa family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3-201ENST00000319234 GALNT6Q8NCL4 622 aa17.09■□□□□ 0.33
SHISA3-201ENST00000319234 NUP43Q8NFH3 380 aa17.09■□□□□ 0.33
SHISA3-201ENST00000319234 OR4K14Q8NGD5 310 aa17.09■□□□□ 0.33
SHISA3-201ENST00000319234 CLDN23Q96B33 292 aa17.09■□□□□ 0.33
SHISA3-201ENST00000319234 EFHD2Q96C19 240 aaPredicted RBP17.09■□□□□ 0.33
SHISA3-201ENST00000319234 TREX2Q9BQ50 279 aaPredicted RBP17.09■□□□□ 0.33
SHISA3-201ENST00000319234 SPATA5L1Q9BVQ7 753 aa17.09■□□□□ 0.33
SHISA3-201ENST00000319234 MIR1-1HGQ9H1L0 117 aa17.09■□□□□ 0.33
SHISA3-201ENST00000319234 UCK1Q9HA47 277 aa17.09■□□□□ 0.33
SHISA3-201ENST00000319234 TBC1D17Q9HA65 648 aa17.09■□□□□ 0.33
SHISA3-201ENST00000319234 SEC14L4Q9UDX3 406 aa17.09■□□□□ 0.33
SHISA3-201ENST00000319234 MRPS2Q9Y399 296 aaKnown RBP17.09■□□□□ 0.33
SHISA3-201ENST00000319234 SLC22A7Q9Y694 548 aa17.09■□□□□ 0.33
SHISA3-201ENST00000319234 GOLGA4Q13439 2230 aaKnown RBP17.09■□□□□ 0.33
SHISA3-201ENST00000319234 A0A1W2PRQ8 180 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 DNAJB6O75190 326 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 UGT2B17O75795 530 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 DLGAP3O95886 979 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 MC3RP41968 323 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 FASLGP48023 281 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 GNA13Q14344 377 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 SLC25A30Q5SVS4 291 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 MFSD4BQ5TF39 518 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 DEF8Q6ZN54 512 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 LRRC25Q8N386 305 aaPredicted RBP17.08■□□□□ 0.33
SHISA3-201ENST00000319234 BBS10Q8TAM1 723 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 CHAC2Q8WUX2 184 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 IL4I1Q96RQ9 567 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 HHATLQ9HCP6 504 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 BCL2L10Q9HD36 194 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 TRAPPC4Q9Y296 219 aa17.08■□□□□ 0.33
SHISA3-201ENST00000319234 NINQ8N4C6 2090 aa17.08■□□□□ 0.32
SHISA3-201ENST00000319234 H3BN98 237 aa17.08■□□□□ 0.32
SHISA3-201ENST00000319234 GPX5O75715 221 aa17.08■□□□□ 0.32
SHISA3-201ENST00000319234 UBXN7O94888 489 aa17.08■□□□□ 0.32
SHISA3-201ENST00000319234 ST6GAL1P15907 406 aa17.08■□□□□ 0.32
SHISA3-201ENST00000319234 VSX2P58304 361 aaPredicted RBP17.08■□□□□ 0.32
SHISA3-201ENST00000319234 SPHARQ15513 63 aa17.08■□□□□ 0.32
SHISA3-201ENST00000319234 FAM83FQ8NEG4 500 aaPredicted RBP17.08■□□□□ 0.32
SHISA3-201ENST00000319234 PROKR2Q8NFJ6 384 aa17.08■□□□□ 0.32
SHISA3-201ENST00000319234 HTRA1Q92743 480 aa17.08■□□□□ 0.32
SHISA3-201ENST00000319234 YIPF4Q9BSR8 244 aa17.08■□□□□ 0.32
SHISA3-201ENST00000319234 RSPO3Q9BXY4 272 aaPredicted RBP17.08■□□□□ 0.32
SHISA3-201ENST00000319234 STK25O00506 426 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 SEPHS1P49903 392 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 SIM1P81133 766 aaPredicted RBP17.07■□□□□ 0.32
SHISA3-201ENST00000319234 SLC36A4Q6YBV0 504 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 USP53Q70EK8 1073 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 FAM26EQ8N5C1 309 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 VANGL1Q8TAA9 524 aaPredicted RBP17.07■□□□□ 0.32
SHISA3-201ENST00000319234 C16orf58Q96GQ5 468 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 SPACA7Q96KW9 195 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 CEP19Q96LK0 163 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 HSPA12BQ96MM6 686 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 CCDC3Q9BQI4 270 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 FAM60AQ9NP50 221 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 QPCTLQ9NXS2 382 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 KLHL3Q9UH77 587 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 A4GNTQ9UNA3 340 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 SLC9A8Q9Y2E8 581 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 SPACA6W5XKT8 324 aa17.07■□□□□ 0.32
SHISA3-201ENST00000319234 SNPHO15079 494 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 ASNA1O43681 348 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 CSO75390 466 aaKnown RBP17.06■□□□□ 0.32
SHISA3-201ENST00000319234 PSMA1P25786 263 aaKnown RBP17.06■□□□□ 0.32
SHISA3-201ENST00000319234 GTF2E2P29084 291 aaKnown RBP17.06■□□□□ 0.32
SHISA3-201ENST00000319234 NXPH1P58417 271 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 ZNF91Q05481 1191 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 MLLT11Q13015 90 aaPredicted RBP17.06■□□□□ 0.32
SHISA3-201ENST00000319234 C1DQ13901 141 aaKnown RBP17.06■□□□□ 0.32
SHISA3-201ENST00000319234 LTB4RQ15722 352 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 PRAMEF8Q5VWM4 474 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 PRAMEF7Q5VXH5 474 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 SLC34A3Q8N130 599 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 NANOGP1Q8N7R0 232 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 C19orf47Q8N9M1 422 aaKnown RBP17.06■□□□□ 0.32
SHISA3-201ENST00000319234 OR4D11Q8NGI4 311 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 OR9Q1Q8NGQ5 310 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 C1orf216Q8TAB5 229 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 SLC7A13Q8TCU3 470 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 KAT2AQ92830 837 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 SLC30A2Q9BRI3 323 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 POLDIP3Q9BY77 421 aaKnown RBP17.06■□□□□ 0.32
SHISA3-201ENST00000319234 LDHAL6BQ9BYZ2 381 aaPredicted RBP17.06■□□□□ 0.32
SHISA3-201ENST00000319234 TMEM74BQ9NUR3 256 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 DNAJC27Q9NZQ0 273 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 NTMQ9P121 344 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 STUB1Q9UNE7 303 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 A0A0G2JPF8 293 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 ZNF860A6NHJ4 632 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 HNRNPCL2B2RXH8 293 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 HNRNPCL3B7ZW38 293 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 GALR3O60755 368 aaPredicted RBP17.06■□□□□ 0.32
SHISA3-201ENST00000319234 NME6O75414 186 aaPredicted RBP17.06■□□□□ 0.32
SHISA3-201ENST00000319234 KCNK2O95069 426 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 SOX14O95416 240 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 APOA1P02647 267 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 HNRNPCL4P0DMR1 293 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 ZP2Q05996 745 aa17.06■□□□□ 0.32
SHISA3-201ENST00000319234 FUT5Q11128 374 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms