RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 ZNF311Q5JNZ3 666 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 BICRALQ6AI39 1079 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 METTL2BQ6P1Q9 378 aaKnown RBP13.35□□□□□ -0.27
PABPC1-201ENST00000318607 GRHL3Q8TE85 626 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 UBTD2Q8WUN7 234 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 SLC35G5Q96KT7 338 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 TMEM138Q9NPI0 162 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 SLC25A13Q9UJS0 675 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 GTF2A1LQ9UNN4 478 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 GPR55Q9Y2T6 319 aaPredicted RBP13.35□□□□□ -0.27
PABPC1-201ENST00000318607 MN1Q10571 1320 aaPredicted RBP13.35□□□□□ -0.27
PABPC1-201ENST00000318607 TRPM7Q96QT4 1865 aa13.35□□□□□ -0.27
PABPC1-201ENST00000318607 H7C4K7 107 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 C1GALT1C1LP0DN25 315 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 WASP42768 502 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 SNTB2Q13425 540 aaKnown RBP13.34□□□□□ -0.27
PABPC1-201ENST00000318607 MRPL58Q14197 206 aaKnown RBP13.34□□□□□ -0.27
PABPC1-201ENST00000318607 ARHGEF6Q15052 776 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 GRK1Q15835 563 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 HES5Q5TA89 166 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 ZC3H14Q6PJT7 736 aaKnown RBP13.34□□□□□ -0.27
PABPC1-201ENST00000318607 CREB3L2Q70SY1 520 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 FAM129CQ86XR2 697 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 LSMEM1Q8N8F7 131 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 SLC5A11Q8WWX8 675 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 PLD4Q96BZ4 506 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 DPH1Q9BZG8 443 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 TTYH1Q9H313 450 aaPredicted RBP13.34□□□□□ -0.27
PABPC1-201ENST00000318607 RRAGCQ9HB90 399 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 STARD7Q9NQZ5 370 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 SIRT4Q9Y6E7 314 aaPredicted RBP13.34□□□□□ -0.27
PABPC1-201ENST00000318607 LOC100509620A0A075B734 347 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 MMP20O60882 483 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 POP7O75817 140 aaKnown RBP13.34□□□□□ -0.27
PABPC1-201ENST00000318607 HMGN2P05204 90 aaKnown RBP13.34□□□□□ -0.27
PABPC1-201ENST00000318607 PSMB10P40306 273 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 AKR1C2P52895 323 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 E2F1Q01094 437 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 AKR1C1Q04828 323 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 GXYLT1Q4G148 440 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 KLHL36Q8N4N3 616 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 OR8K5Q8NH50 307 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 ASB12Q8WXK4 309 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 KLF16Q9BXK1 252 aaPredicted RBP13.34□□□□□ -0.27
PABPC1-201ENST00000318607 RNF32Q9H0A6 362 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 SLC25A19Q9HC21 320 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 SPG21Q9NZD8 308 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 CACNG2Q9Y698 323 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 OR6C74A6NCV1 312 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 SLC9B1P1A6NJY1 282 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 FAAHO00519 579 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 CHST10O43529 356 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 RECKO95980 971 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 HPXP02790 462 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 HOXB3P14651 431 aaPredicted RBP13.34□□□□□ -0.27
PABPC1-201ENST00000318607 ACSL1P33121 698 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 VEGFCP49767 419 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 RGS1Q08116 209 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 GDPD4Q6W3E5 623 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 SLC36A4Q6YBV0 504 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 NR2C2APQ86WQ0 139 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 MEIOBQ8N635 442 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 SMPDL3AQ92484 453 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 FATE1Q969F0 183 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 OTUB2Q96DC9 234 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 BHLHE41Q9C0J9 482 aaPredicted RBP13.34□□□□□ -0.27
PABPC1-201ENST00000318607 DPAGT1Q9H3H5 408 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 HCFC1R1Q9NWW0 138 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 ADAM30Q9UKF2 790 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 MYO16Q9Y6X6 1858 aa13.34□□□□□ -0.27
PABPC1-201ENST00000318607 WASH3PC4AMC7 463 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 GFYI3L273 518 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 HMGN4O00479 90 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 CCL16O15467 120 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 KHDRBS3O75525 346 aaKnown RBP13.33□□□□□ -0.27
PABPC1-201ENST00000318607 RPP14O95059 124 aaKnown RBP13.33□□□□□ -0.27
PABPC1-201ENST00000318607 ACP5P13686 325 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 GLULP15104 373 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 DSG2Q14126 1118 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 SF3A2Q15428 464 aaKnown RBP13.33□□□□□ -0.27
PABPC1-201ENST00000318607 TP53I3Q53FA7 332 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 BEX5Q5H9J7 111 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 GARNL3Q5VVW2 1013 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 ARSKQ6UWY0 536 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 CHST9Q7L1S5 443 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 TMEM99Q8N816 258 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 BMPERQ8N8U9 685 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 BTN2A2Q8WVV5 523 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 DNAJA4Q8WW22 397 aaPredicted RBP13.33□□□□□ -0.27
PABPC1-201ENST00000318607 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.33□□□□□ -0.273e-8■□□□□ 8.7
PABPC1-201ENST00000318607 USP36Q9P275 1121 aaKnown RBP13.33□□□□□ -0.27
PABPC1-201ENST00000318607 COPS3Q9UNS2 423 aa13.33□□□□□ -0.27
PABPC1-201ENST00000318607 FCMRO60667 390 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 B4GALT2O60909 372 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 CBSLP0DN79 551 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 TFPIP10646 304 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 PTX3P26022 381 aaPredicted RBP13.33□□□□□ -0.28
PABPC1-201ENST00000318607 PKLRP30613 574 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 CBSP35520 551 aa13.33□□□□□ -0.28
PABPC1-201ENST00000318607 SOX2P48431 317 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms