RNA–Protein interactions for RNA: ENST00000316308.8

CLK4-201, Transcript of CDC like kinase 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLK4, Length 2,568 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK4-201ENST00000316308 PILRAQ9UKJ1 303 aa13.79□□□□□ -0.2
CLK4-201ENST00000316308 ZC3H12DA2A288 527 aaKnown RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 FAM183AA6NL82 134 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 UPK1BO75841 260 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 SLC35G6P0C7Q6 338 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 SMIM10L1P0DMW3 83 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 PIPP12273 146 aaPredicted RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 GABRG2P18507 467 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 RFX3P48380 749 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 KIAA1024LP59773 190 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 RPS15AP62244 130 aaKnown RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 SPATC1Q76KD6 591 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 GDF7Q7Z4P5 450 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 OR4F15Q8NGB8 312 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 SMIM10Q96HG1 83 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 ASPNQ9BXN1 380 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 POLDIP3Q9BY77 421 aaKnown RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 C3orf14Q9HBI5 128 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 SNTG1Q9NSN8 517 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 ZSCAN32Q9NX65 697 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 TESQ9UGI8 421 aaKnown RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 SYNDIG1LA6NDD5 238 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 DVL2O14641 736 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 TYRP1P17643 537 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 CAV3P56539 151 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 RGS8P57771 180 aaPredicted RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 PLAURQ03405 335 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 CSTF1Q05048 431 aaKnown RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 PUS10Q3MIT2 529 aaKnown RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 FIGNL1Q6PIW4 674 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 LHFPL3Q86UP9 236 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 PHC2Q8IXK0 858 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 FAM26EQ8N5C1 309 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 FAM160A2Q8N612 972 aaPredicted RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 AMER2Q8N7J2 671 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 MCHR1Q99705 422 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 TM9SF2Q99805 663 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 FAM60AQ9NP50 221 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 RPL36Q9Y3U8 105 aaKnown RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 KCNK2O95069 426 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 ALOX12P18054 663 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 HNRNPA2B1P22626 353 aaKnown RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 SHC2P98077 582 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 RGS1Q08116 209 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 OCLNQ16625 522 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 FAM214AQ32MH5 1076 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 BHLHB9Q6PI77 547 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 USP30Q70CQ3 517 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 KBTBD8Q8NFY9 601 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 TRNT1Q96Q11 434 aaKnown RBP13.78□□□□□ -0.2
CLK4-201ENST00000316308 RACGAP1Q9H0H5 632 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 LMAN2LQ9H0V9 348 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 C20orf141Q9NUB4 165 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 CD207Q9UJ71 328 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 SLC7A7Q9UM01 511 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 CSNK1G3Q9Y6M4 447 aa13.78□□□□□ -0.2
CLK4-201ENST00000316308 H3BQ06 376 aaPredicted RBP13.77□□□□□ -0.21
CLK4-201ENST00000316308 CASC3O15234 703 aaKnown RBP13.77□□□□□ -0.21
CLK4-201ENST00000316308 PRKNO60260 465 aaPredicted RBP13.77□□□□□ -0.21
CLK4-201ENST00000316308 GUCY1B2O75343 617 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 CCNYL3P0C7X3 344 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 DDX5P17844 614 aaKnown RBP13.77□□□□□ -0.21
CLK4-201ENST00000316308 HTR2AP28223 471 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 RHAGQ02094 409 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 NCF4Q15080 339 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 CD300LDQ6UXZ3 194 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 UTS2BQ765I0 119 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 SRFBP1Q8NEF9 429 aaKnown RBP13.77□□□□□ -0.21
CLK4-201ENST00000316308 OR4K14Q8NGD5 310 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 C9orf43Q8TAL5 461 aaPredicted RBP13.77□□□□□ -0.21
CLK4-201ENST00000316308 ATP13A2Q9NQ11 1180 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 ZNF229Q9UJW7 825 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 PCOLCE2Q9UKZ9 415 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 LIPT1Q9Y234 373 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 ZNF443Q9Y2A4 671 aaPredicted RBP13.77□□□□□ -0.21
CLK4-201ENST00000316308 HEBP2Q9Y5Z4 205 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 SEC16AO15027 2179 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 SGK494L7N484 410 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 CPMP14384 443 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 PORP16435 677 aaPredicted RBP13.77□□□□□ -0.21
CLK4-201ENST00000316308 CD97P48960 835 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 ZNF136P52737 540 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 SMIM11AP58511 58 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 RPS25P62851 125 aaKnown RBP13.77□□□□□ -0.21
CLK4-201ENST00000316308 HEPHL1Q6MZM0 1159 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 PLEKHM3Q6ZWE6 761 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 LAX1Q8IWV1 398 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 OR2L13Q8N349 312 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 POC5Q8NA72 575 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 OR9Q1Q8NGQ5 310 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 PFN4Q8NHR9 129 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 RLN3Q8WXF3 142 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 RSC1A1Q92681 617 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 RNFT2Q96EX2 444 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 SDF2Q99470 211 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 SPATA5L1Q9BVQ7 753 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 NUAK2Q9H093 628 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 MED20Q9H944 212 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 TOR4AQ9NXH8 423 aa13.77□□□□□ -0.21
CLK4-201ENST00000316308 NCKAP1Q9Y2A7 1128 aa13.77□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms