RNA–Protein interactions for RNA: ENST00000314121.8

ZNF541-202, Transcript of zinc finger protein 541, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene ZNF541, Length 4,631 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF541-202ENST00000314121 TREX2Q9BQ50 279 aaPredicted RBP13.12□□□□□ -0.31
ZNF541-202ENST00000314121 OR10A4Q9H209 315 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 C11orf49Q9H6J7 331 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 RNF186Q9NXI6 227 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 PGAP2Q9UHJ9 254 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 GPR34Q9UPC5 381 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 NME7Q9Y5B8 376 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 TUBGCP6Q96RT7 1819 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 NDUFB2O95178 105 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 SPARCP09486 303 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 AGTR1P30556 359 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 RNF144AP50876 292 aaPredicted RBP13.12□□□□□ -0.31
ZNF541-202ENST00000314121 TRA2BP62995 288 aaKnown RBP13.12□□□□□ -0.31
ZNF541-202ENST00000314121 OXA1LQ15070 435 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 LRIF1Q5T3J3 769 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 DUS1LQ6P1R4 473 aaKnown RBP13.12□□□□□ -0.31
ZNF541-202ENST00000314121 C12orf40Q86WS4 652 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 TMEM173Q86WV6 379 aaPredicted RBP13.12□□□□□ -0.31
ZNF541-202ENST00000314121 ZNF584Q8IVC4 421 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 CDRT4Q8N9R6 151 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 TRIM43Q96BQ3 446 aaPredicted RBP13.12□□□□□ -0.31
ZNF541-202ENST00000314121 ATG5Q9H1Y0 275 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 PCDH10Q9P2E7 1040 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 NUBP2Q9Y5Y2 271 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 CACNG2Q9Y698 323 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 LOC105369274A0A096LPK9 316 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 A8MU76 341 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 IGLV3-25P01717 112 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 TIMP2P16035 220 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 PRKCAP17252 672 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 LIPAP38571 399 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 MAN2A2P49641 1150 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 CEBPGP53567 150 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 ILKQ13418 452 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 SYPL1Q16563 259 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 ZNF800Q2TB10 664 aaPredicted RBP eCLIP13.12□□□□□ -0.31
ZNF541-202ENST00000314121 FAM76BQ5HYJ3 339 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 LIN28BQ6ZN17 250 aaKnown RBP eCLIP13.12□□□□□ -0.31
ZNF541-202ENST00000314121 FAM83HQ6ZRV2 1179 aaPredicted RBP13.12□□□□□ -0.31
ZNF541-202ENST00000314121 OR4N4Q8N0Y3 316 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 HORMAD2Q8N7B1 307 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 GATSQ8NAP1 163 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 PRRG4Q9BZD6 226 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 DDX31Q9H8H2 851 aaKnown RBP13.12□□□□□ -0.31
ZNF541-202ENST00000314121 HSFX1Q9UBD0 423 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 KIAA1551Q9HCM1 1747 aa13.12□□□□□ -0.31
ZNF541-202ENST00000314121 OR2A25A4D2G3 310 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 OR6C74A6NCV1 312 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 HCRTR2O43614 444 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 ADAMTS4O75173 837 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 CTBP2P56545 445 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 LRRC37A5PQ49AS3 106 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 METAP1DQ6UB28 335 aaPredicted RBP13.11□□□□□ -0.31
ZNF541-202ENST00000314121 ACOT4Q8N9L9 421 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 OR2T4Q8NH00 348 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 DOK4Q8TEW6 326 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 ORAI3Q9BRQ5 295 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 CHMP1AQ9HD42 196 aaPredicted RBP13.11□□□□□ -0.31
ZNF541-202ENST00000314121 BABAM2Q9NXR7 383 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 SLC7A7Q9UM01 511 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 OR1A2Q9Y585 309 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 DNMT3AQ9Y6K1 912 aaPredicted RBP13.11□□□□□ -0.31
ZNF541-202ENST00000314121 OR5K4A6NMS3 321 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 IL1RNP18510 177 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 SLC6A9P48067 706 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 FXYD6P3P58550 94 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 SLC7A9P82251 487 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 NNATQ16517 81 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 LYSMD2Q8IV50 215 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 LRRC56Q8IYG6 542 aaPredicted RBP13.11□□□□□ -0.31
ZNF541-202ENST00000314121 ZNF440Q8IYI8 595 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 CSNK1A1LQ8N752 337 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 RASGEF1AQ8N9B8 481 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 POGLUT1Q8NBL1 392 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 PXYLP1Q8TE99 480 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 TMEM239Q8WW34 195 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 MMABQ96EY8 250 aaPredicted RBP13.11□□□□□ -0.31
ZNF541-202ENST00000314121 ABCG4Q9H172 646 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 OR51J1Q9H342 316 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 DUSP21Q9H596 190 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 TMEM30AQ9NV96 361 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 KLHL21Q9UJP4 597 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 POU2F3Q9UKI9 436 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 ARAP2Q8WZ64 1704 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 SCN7AQ01118 1682 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 HPGDSO60760 199 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 RBMXL2O75526 392 aaKnown RBP13.11□□□□□ -0.31
ZNF541-202ENST00000314121 APOC3P02656 99 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 SCG5P05408 212 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 CSF2RAP15509 400 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 IMPA1P29218 277 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 OR2G6Q5TZ20 316 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 METTL11BQ5VVY1 283 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 LRRC28Q86X40 367 aaPredicted RBP13.11□□□□□ -0.31
ZNF541-202ENST00000314121 FOXRED2Q8IWF2 684 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 PDZD9Q8IXQ8 264 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 COQ10AQ96MF6 247 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 LDHAL6BQ9BYZ2 381 aaPredicted RBP13.11□□□□□ -0.31
ZNF541-202ENST00000314121 C11orf98E9PRG8 122 aa13.11□□□□□ -0.31
ZNF541-202ENST00000314121 PRAF2O60831 178 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms