RNA–Protein interactions for RNA: ENST00000310546.2

SPSB4-201, Transcript of splA/ryanodine receptor domain and SOCS box containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPSB4, Length 2,908 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPSB4-201ENST00000310546 SGK2Q9HBY8 427 aa16.97■□□□□ 0.31
SPSB4-201ENST00000310546 KLF2Q9Y5W3 355 aaPredicted RBP16.97■□□□□ 0.31
SPSB4-201ENST00000310546 PRSS44E7EML9 344 aa16.96■□□□□ 0.31
SPSB4-201ENST00000310546 SAP18O00422 153 aaKnown RBP16.96■□□□□ 0.31
SPSB4-201ENST00000310546 VNN2O95498 520 aa16.96■□□□□ 0.31
SPSB4-201ENST00000310546 SNTB2Q13425 540 aaKnown RBP16.96■□□□□ 0.31
SPSB4-201ENST00000310546 FAM27D1Q5T7N8 215 aa16.96■□□□□ 0.31
SPSB4-201ENST00000310546 TNFAIP8L2Q6P589 184 aaPredicted RBP16.96■□□□□ 0.31
SPSB4-201ENST00000310546 Q6ZTK2 550 aa16.96■□□□□ 0.31
SPSB4-201ENST00000310546 TEFMQ96QE5 360 aaKnown RBP16.96■□□□□ 0.31
SPSB4-201ENST00000310546 EXOSC1Q9Y3B2 195 aaKnown RBP16.96■□□□□ 0.31
SPSB4-201ENST00000310546 DNAH14Q0VDD8 3507 aa16.96■□□□□ 0.31
SPSB4-201ENST00000310546 PRR23D1E9PI22 279 aaPredicted RBP16.96■□□□□ 0.3
SPSB4-201ENST00000310546 SOX30O94993 753 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 FGF2P09038 288 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 PRR23D2P0DMB1 279 aaPredicted RBP16.96■□□□□ 0.3
SPSB4-201ENST00000310546 RFX3P48380 749 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 CLEC12AQ5QGZ9 265 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 HBMQ6B0K9 141 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 SFRP4Q6FHJ7 346 aaPredicted RBP16.96■□□□□ 0.3
SPSB4-201ENST00000310546 KIAA1161Q6NSJ0 714 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 MACC1Q6ZN28 852 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 VRK3Q8IV63 474 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 WDR20Q8TBZ3 569 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 SPRYD4Q8WW59 207 aaPredicted RBP16.96■□□□□ 0.3
SPSB4-201ENST00000310546 MED8Q96G25 268 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 VN1R3Q9BXE9 311 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 PLA2G12AQ9BZM1 189 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 EGLN3Q9H6Z9 239 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 ISYNA1Q9NPH2 558 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 MRPL15Q9P015 296 aaKnown RBP16.96■□□□□ 0.3
SPSB4-201ENST00000310546 GREB1Q4ZG55 1949 aa16.96■□□□□ 0.3
SPSB4-201ENST00000310546 MID1O15344 667 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 RHOCP08134 193 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 ARAFP10398 606 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 MMP11P24347 488 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 POLR2GP62487 172 aaKnown RBP eCLIP16.95■□□□□ 0.3
SPSB4-201ENST00000310546 REEP3Q6NUK4 255 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 GPR32P1Q8NGA4 272 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 GPA33Q99795 319 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 FGF20Q9NP95 211 aaPredicted RBP16.95■□□□□ 0.3
SPSB4-201ENST00000310546 MLXQ9UH92 298 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 F8W036 122 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 AIPO00170 330 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 FZD7O75084 574 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 CH25HO95992 272 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 GJA1P17302 382 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 NFYAP23511 347 aaPredicted RBP16.95■□□□□ 0.3
SPSB4-201ENST00000310546 SHC1P29353 583 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 PODNL1Q6PEZ8 512 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 C16orf59Q7L2K0 433 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 PAQR7Q86WK9 346 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 SLC12A9Q9BXP2 914 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 RSPO3Q9BXY4 272 aaPredicted RBP16.95■□□□□ 0.3
SPSB4-201ENST00000310546 TM6SF2Q9BZW4 377 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 KLHL1Q9NR64 748 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 CFAP97Q9P2B7 532 aa16.95■□□□□ 0.3
SPSB4-201ENST00000310546 HOXA1P49639 335 aaPredicted RBP16.94■□□□□ 0.3
SPSB4-201ENST00000310546 PFN3P60673 137 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 PYHIN1Q6K0P9 492 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 ZER1Q7Z7L7 766 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 IQCHQ86VS3 1027 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 FBXO22Q8NEZ5 403 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 OR56B4Q8NH76 319 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 YIPF5Q969M3 257 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 LRRC46Q96FV0 321 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 TRIOO75962 3097 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 C21orf58P58505 322 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 NCEH1Q6PIU2 408 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 SLC36A4Q6YBV0 504 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 BTN2A1Q7KYR7 527 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 ZNF485Q8NCK3 441 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 FBXO15Q8NCQ5 510 aaPredicted RBP16.94■□□□□ 0.3
SPSB4-201ENST00000310546 GPR26Q8NDV2 337 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 OR4D11Q8NGI4 311 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 TRMT10AQ8TBZ6 339 aaKnown RBP16.94■□□□□ 0.3
SPSB4-201ENST00000310546 TRIM43Q96BQ3 446 aaPredicted RBP16.94■□□□□ 0.3
SPSB4-201ENST00000310546 C20orf85Q9H1P6 137 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 ZNF768Q9H5H4 540 aaKnown RBP16.94■□□□□ 0.3
SPSB4-201ENST00000310546 GKN1Q9NS71 199 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 IL20Q9NYY1 176 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 MGAT4CQ9UBM8 478 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 RPS6KB2Q9UBS0 482 aa16.94■□□□□ 0.3
SPSB4-201ENST00000310546 H7C2Y5 167 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 EFCAB14O75071 495 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 WNT1P04628 370 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 HOXB1P14653 301 aaPredicted RBP16.93■□□□□ 0.3
SPSB4-201ENST00000310546 NPR2P20594 1047 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 SLC6A11P48066 632 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 EOGTQ5NDL2 527 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 IER5LQ5T953 404 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 VASNQ6EMK4 673 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 ESPNLQ6ZVH7 1005 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 CAMKMTQ7Z624 323 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 RAB8BQ92930 207 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 PPCDCQ96CD2 204 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 DMRTA2Q96SC8 542 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 SLC38A3Q99624 504 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 OR51B5Q9H339 312 aa16.93■□□□□ 0.3
SPSB4-201ENST00000310546 REEP4Q9H6H4 257 aa16.93■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms