RNA–Protein interactions for RNA: ENST00000309428.9

RETREG3-201, Transcript of reticulophagy regulator family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RETREG3, Length 3,759 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RETREG3-201ENST00000309428 CEACAM19Q7Z692 300 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 METTL3Q86U44 580 aaKnown RBP11.92□□□□□ -0.5
RETREG3-201ENST00000309428 C1orf216Q8TAB5 229 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 ADAMTS15Q8TE58 950 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 DTD2Q96FN9 168 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 COQ10AQ96MF6 247 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 DPH7Q9BTV6 452 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 GTPBP2Q9BX10 602 aaKnown RBP11.92□□□□□ -0.5
RETREG3-201ENST00000309428 KLHL31Q9H511 634 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 GLTPQ9NZD2 209 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 TBC1D24Q9ULP9 559 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 UNC13CQ8NB66 2214 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 NLRC5Q86WI3 1866 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 C1QTNF3-AMACRE9PGA6 284 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 GFYI3L273 518 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 SLC9A3R1O14745 358 aaPredicted RBP11.92□□□□□ -0.5
RETREG3-201ENST00000309428 PI15O43692 258 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 LCMT2O60294 686 aaKnown RBP11.92□□□□□ -0.5
RETREG3-201ENST00000309428 LCN1P31025 176 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 RAE1P78406 368 aaKnown RBP11.92□□□□□ -0.5
RETREG3-201ENST00000309428 SNTB2Q13425 540 aaKnown RBP11.92□□□□□ -0.5
RETREG3-201ENST00000309428 EFR3AQ14156 821 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 EIF4HQ15056 248 aaKnown RBP11.92□□□□□ -0.5
RETREG3-201ENST00000309428 LTB4RQ15722 352 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 GRHL2Q6ISB3 625 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 SLC27A4Q6P1M0 643 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 SYT9Q86SS6 491 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 PIGXQ8TBF5 258 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 PATE1Q8WXA2 126 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 PPP1R16AQ96I34 528 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 GRXCR2A6NFK2 248 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 LRRC72A6NJI9 287 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 ZNF780AO75290 641 aaPredicted RBP11.92□□□□□ -0.5
RETREG3-201ENST00000309428 PBX2P40425 430 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 WNT4P56705 351 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 PSPHP78330 225 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 KCNJ10P78508 379 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 VEZF1Q14119 521 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 BCL2A1Q16548 175 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 C18orf63Q68DL7 685 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 ZNF767PQ75MW2 155 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 CPXM2Q8N436 756 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 L3MBTL4Q8NA19 623 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 CCL4L1Q8NHW4 92 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 SPPL3Q8TCT6 385 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 SNX33Q8WV41 574 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 ELMOD3Q96FG2 381 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 MED30Q96HR3 178 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 MCCC1Q96RQ3 725 aaPredicted RBP11.92□□□□□ -0.5
RETREG3-201ENST00000309428 WFDC6Q9BQY6 131 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 NARFLQ9H6Q4 476 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 NEUROG3Q9Y4Z2 214 aa11.92□□□□□ -0.5
RETREG3-201ENST00000309428 A0A0G2JMP0 313 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 A0A0X1KG70 313 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 UBE2QL1A1L167 161 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 H3BUI4 141 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 CHST10O43529 356 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 HRO43593 1189 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 KAT7O95251 611 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 CXCL10P02778 98 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 MT-ND4P03905 459 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 ALDOBP05062 364 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 GYPBP06028 91 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 CERS1P27544 350 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 SOX18P35713 384 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 MLLT3P42568 568 aaPredicted RBP11.91□□□□□ -0.5
RETREG3-201ENST00000309428 PXNP49023 591 aaPredicted RBP11.91□□□□□ -0.5
RETREG3-201ENST00000309428 CCR6P51684 374 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 PRSS53Q2L4Q9 553 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 ZNF311Q5JNZ3 666 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 LRRTM4Q86VH4 590 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 ZNF547Q8IVP9 402 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 SFTPA2Q8IWL1 248 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 OR4M2Q8NGB6 313 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 SETD6Q8TBK2 473 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 GRHL3Q8TE85 626 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 SMAP2Q8WU79 429 aaPredicted RBP11.91□□□□□ -0.5
RETREG3-201ENST00000309428 TM9SF4Q92544 642 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 OPALINQ96PE5 141 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 EFCAB11Q9BUY7 163 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 KCNN2Q9H2S1 579 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 SLC23A1Q9UHI7 598 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 MGAT4BQ9UQ53 548 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 MAB21L2Q9Y586 359 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 ATP6V1G2-DDX39BF2Z307 99 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 POLR1CO15160 346 aaPredicted RBP11.91□□□□□ -0.5
RETREG3-201ENST00000309428 GPX2P18283 190 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 RPL3P39023 403 aaKnown RBP11.91□□□□□ -0.5
RETREG3-201ENST00000309428 P2RY2P41231 377 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 SOX2P48431 317 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 PLBD1Q6P4A8 553 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 ALKAL2Q6UX46 152 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 CFAP77Q6ZQR2 320 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 ESPNLQ6ZVH7 1005 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 KANSL1Q7Z3B3 1105 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 SHISA5Q8N114 240 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 SRFBP1Q8NEF9 429 aaKnown RBP11.91□□□□□ -0.5
RETREG3-201ENST00000309428 OR52N2Q8NGI0 321 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 RFKQ969G6 155 aa11.91□□□□□ -0.5
RETREG3-201ENST00000309428 MED20Q9H944 212 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms