RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 TMEM139Q8IV31 216 aa10.53□□□□□ -0.72
SMIM4-201ENST00000307106 OR52B6Q8NGF0 335 aa10.53□□□□□ -0.72
SMIM4-201ENST00000307106 PIWIL2Q8TC59 973 aaKnown RBP10.53□□□□□ -0.72
SMIM4-201ENST00000307106 RNF138Q8WVD3 245 aa10.53□□□□□ -0.72
SMIM4-201ENST00000307106 HSD17B8Q92506 261 aa10.53□□□□□ -0.72
SMIM4-201ENST00000307106 MAGOHBQ96A72 148 aaKnown RBP10.53□□□□□ -0.72
SMIM4-201ENST00000307106 MSI2Q96DH6 328 aaKnown RBP10.53□□□□□ -0.72
SMIM4-201ENST00000307106 TSPY26PQ9H489 355 aa10.53□□□□□ -0.72
SMIM4-201ENST00000307106 ZBTB26Q9HCK0 441 aa10.53□□□□□ -0.72
SMIM4-201ENST00000307106 GLRX2Q9NS18 164 aa10.53□□□□□ -0.72
SMIM4-201ENST00000307106 MED11Q9P086 117 aa10.53□□□□□ -0.72
SMIM4-201ENST00000307106 GPR55Q9Y2T6 319 aaPredicted RBP10.53□□□□□ -0.72
SMIM4-201ENST00000307106 TSC22D4Q9Y3Q8 395 aa10.53□□□□□ -0.72
SMIM4-201ENST00000307106 AP4B1Q9Y6B7 739 aa10.53□□□□□ -0.72
SMIM4-201ENST00000307106 GOLGA6L10A6NI86 522 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 SHISA9B4DS77 424 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 K7EPI3 171 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 WISP3O95389 354 aaPredicted RBP10.52□□□□□ -0.73
SMIM4-201ENST00000307106 ATP1B1P05026 303 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 TUBBP07437 444 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 CCDC166P0CW27 439 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 CD1DP15813 335 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 AGTR1P30556 359 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 EVI2BP34910 448 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 FEN1P39748 380 aaKnown RBP10.52□□□□□ -0.73
SMIM4-201ENST00000307106 PNLIPRP2P54317 469 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 SLC12A2P55011 1212 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 GPX6P59796 221 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 PDLIM3Q53GG5 364 aaPredicted RBP10.52□□□□□ -0.73
SMIM4-201ENST00000307106 TRMT12Q53H54 448 aaKnown RBP10.52□□□□□ -0.73
SMIM4-201ENST00000307106 C11orf71Q6IPW1 123 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 CCDC137Q6PK04 289 aaKnown RBP10.52□□□□□ -0.73
SMIM4-201ENST00000307106 LARP4Q71RC2 724 aaKnown RBP eCLIP10.52□□□□□ -0.73
SMIM4-201ENST00000307106 GABRG1Q8N1C3 465 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 DEPDC4Q8N2C3 294 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 NAP1L3Q99457 506 aaPredicted RBP10.52□□□□□ -0.73
SMIM4-201ENST00000307106 PTGES2Q9H7Z7 377 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 CBLN4Q9NTU7 201 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 OPTCQ9UBM4 332 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 ASIC3Q9UHC3 531 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 MCTS1Q9ULC4 181 aaKnown RBP10.52□□□□□ -0.73
SMIM4-201ENST00000307106 CHMP2BQ9UQN3 213 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 PCDHGA11Q9Y5H2 935 aa10.52□□□□□ -0.73
SMIM4-201ENST00000307106 ERAL1O75616 437 aaKnown RBP10.51□□□□□ -0.73
SMIM4-201ENST00000307106 CSF3P09919 207 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 CT45A8P0DMV1 189 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 CT45A9P0DMV2 189 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 TTKP33981 857 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 ELK3P41970 407 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 CORO7P57737 925 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 ATP6V0D1P61421 351 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 MRPS35P82673 323 aaKnown RBP10.51□□□□□ -0.73
SMIM4-201ENST00000307106 STX5Q13190 355 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 GGTLC2Q14390 218 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 CR1LQ2VPA4 569 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 CT45A2Q5DJT8 189 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 MFSD12Q6NUT3 480 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 EXOC3L1Q86VI1 746 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 CCDC25Q86WR0 208 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 OR10D3Q8NH80 312 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 KISS1RQ969F8 398 aaPredicted RBP10.51□□□□□ -0.73
SMIM4-201ENST00000307106 EFHD2Q96C19 240 aaPredicted RBP10.51□□□□□ -0.73
SMIM4-201ENST00000307106 C1GALT1C1Q96EU7 318 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 BTBD9Q96Q07 612 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 POTEKPQ9BYX7 375 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 DDX47Q9H0S4 455 aaKnown RBP10.51□□□□□ -0.73
SMIM4-201ENST00000307106 SDHAF3Q9NRP4 125 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 PAQR5Q9NXK6 330 aaPredicted RBP10.51□□□□□ -0.73
SMIM4-201ENST00000307106 STOML1Q9UBI4 398 aa10.51□□□□□ -0.73
SMIM4-201ENST00000307106 SHISA8B8ZZ34 492 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 H0YIV9 168 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 ABCD4O14678 606 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 PHGDHO43175 533 aaKnown RBP10.5□□□□□ -0.73
SMIM4-201ENST00000307106 NME6O75414 186 aaPredicted RBP10.5□□□□□ -0.73
SMIM4-201ENST00000307106 SYNGR4O95473 234 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 PCSK2P16519 638 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 CSNK2A2P19784 350 aaPredicted RBP10.5□□□□□ -0.73
SMIM4-201ENST00000307106 MRPS22P82650 360 aaKnown RBP10.5□□□□□ -0.73
SMIM4-201ENST00000307106 DUSP2Q05923 314 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 LTB4RQ15722 352 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 CPSF6Q16630 551 aaKnown RBP eCLIP10.5□□□□□ -0.73
SMIM4-201ENST00000307106 GLYR1Q49A26 553 aaPredicted RBP10.5□□□□□ -0.73
SMIM4-201ENST00000307106 LGSNQ5TDP6 509 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 LIPJQ5W064 366 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 STEAP4Q687X5 459 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 SLC48A1Q6P1K1 146 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 TFAP2EQ6VUC0 442 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 C3orf56Q8N813 242 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 PPM1NQ8N819 430 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 BANPQ8N9N5 519 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 UHMK1Q8TAS1 419 aaKnown RBP10.5□□□□□ -0.73
SMIM4-201ENST00000307106 HBEGFQ99075 208 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 USB1Q9BQ65 265 aaKnown RBP10.5□□□□□ -0.73
SMIM4-201ENST00000307106 PRR14Q9BWN1 585 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 RHOJQ9H4E5 214 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 ANKRA2Q9H9E1 313 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 CAB39LQ9H9S4 337 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 CES1P1Q9UKY3 287 aa10.5□□□□□ -0.73
SMIM4-201ENST00000307106 C1orf226A1L170 272 aa10.49□□□□□ -0.73
SMIM4-201ENST00000307106 H7C417 338 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms