RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 AKR1D1P51857 326 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 CHRNEQ04844 493 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 FXNQ16595 210 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 MLIPQ5VWP3 458 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 PRICKLE2Q7Z3G6 844 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 FGD2Q7Z6J4 655 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 NKAIN4Q8IVV8 208 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 SFTPA1Q8IWL2 248 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 DPH7Q9BTV6 452 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 OR10A4Q9H209 315 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 CCDC59Q9P031 241 aaKnown RBP13.71□□□□□ -0.22
PTPN9-201ENST00000306726 ENOPH1Q9UHY7 261 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 KLK4Q9Y5K2 254 aa13.71□□□□□ -0.22
PTPN9-201ENST00000306726 TP53BP1Q12888 1972 aaPredicted RBP13.7□□□□□ -0.22
PTPN9-201ENST00000306726 ZNF670-ZNF695F2Z2N8 137 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 PSMB10P40306 273 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 PNLIPRP1P54315 467 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 PLEKHS1Q5SXH7 462 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 NDUFAF5Q5TEU4 345 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 METTL2BQ6P1Q9 378 aaKnown RBP13.7□□□□□ -0.22
PTPN9-201ENST00000306726 MTSS1LQ765P7 747 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 ATCAYQ86WG3 371 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 ZNF582Q96NG8 517 aaPredicted RBP13.7□□□□□ -0.22
PTPN9-201ENST00000306726 CCDC32Q9BV29 185 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 SLC25A18Q9H1K4 315 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 MIXL1Q9H2W2 232 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 TMEM138Q9NPI0 162 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 KLHL28Q9NXS3 571 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 NLGN3Q9NZ94 848 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 SNTNA6NMZ2 147 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 POLR1CO15160 346 aaPredicted RBP13.7□□□□□ -0.22
PTPN9-201ENST00000306726 ZNF821O75541 412 aaPredicted RBP13.7□□□□□ -0.22
PTPN9-201ENST00000306726 DHFRP00374 187 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 UCHL1P09936 223 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 SLC35G4P0C7Q5 338 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 CLUP10909 449 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 SNRPBP14678 240 aaKnown RBP13.7□□□□□ -0.22
PTPN9-201ENST00000306726 ARSBP15848 533 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 MC3RP41968 323 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 TGM3Q08188 693 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 MESP2Q0VG99 397 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 C18orf63Q68DL7 685 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 NXPE4Q6UWF7 544 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 ARL14Q8N4G2 192 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 COQ8AQ8NI60 647 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 FOXN4Q96NZ1 517 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 PITX2Q99697 317 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 AIF1LQ9BQI0 150 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 IL21Q9HBE4 155 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 V9GYH0 126 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 LRRC72A6NJI9 287 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 MPZL2O60487 215 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 FCMRO60667 390 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 SOCS5O75159 536 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 ZNF250P15622 560 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 RPL4P36578 427 aaKnown RBP13.7□□□□□ -0.22
PTPN9-201ENST00000306726 UBE2MP61081 183 aaKnown RBP13.7□□□□□ -0.22
PTPN9-201ENST00000306726 SIM1P81133 766 aaPredicted RBP13.7□□□□□ -0.22
PTPN9-201ENST00000306726 ADAM15Q13444 863 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 FGL2Q14314 439 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 ATXN7L3Q14CW9 347 aaPredicted RBP13.7□□□□□ -0.22
PTPN9-201ENST00000306726 SLC25A25Q6KCM7 469 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 LIPIQ6XZB0 460 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 PPP1R16AQ96I34 528 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 MCHR1Q99705 422 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 GABARAPL3Q9BY60 117 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 FLVCR2Q9UPI3 526 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 PLEKHM1Q9Y4G2 1056 aa13.7□□□□□ -0.22
PTPN9-201ENST00000306726 RNASET2O00584 256 aaKnown RBP13.69□□□□□ -0.22
PTPN9-201ENST00000306726 PLPP1O14494 284 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 PLA2G10O15496 165 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 LANCL1O43813 399 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 DOK2O60496 412 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 C1orf105O95561 183 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 FBXO45P0C2W1 286 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 TIMP2P16035 220 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 CHTF18Q8WVB6 975 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 EFCAB11Q9BUY7 163 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 B3GAT2Q9NPZ5 323 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 OBP2AQ9NY56 170 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 ZAR1LA6NP61 321 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 TMPRSS11DO60235 418 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 SLC6A11P48066 632 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 CRYZQ08257 329 aaKnown RBP13.69□□□□□ -0.22
PTPN9-201ENST00000306726 COL19A1Q14993 1142 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 GRASPQ7Z6J2 395 aaPredicted RBP13.69□□□□□ -0.22
PTPN9-201ENST00000306726 PEX5LQ8IYB4 626 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 TOMM5Q8N4H5 51 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 FAM98AQ8NCA5 519 aaKnown RBP13.69□□□□□ -0.22
PTPN9-201ENST00000306726 SIMC1Q8NDZ2 872 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 OR9A2Q8NGT5 310 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 OR2T35Q8NGX2 323 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 CREB3L4Q8TEY5 395 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 UPRTQ96BW1 309 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 ORAI3Q9BRQ5 295 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 ATP13A2Q9NQ11 1180 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 P2RX2Q9UBL9 471 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 TRIM64BA6NI03 449 aa13.69□□□□□ -0.22
PTPN9-201ENST00000306726 SLC9A3R1O14745 358 aaPredicted RBP13.69□□□□□ -0.22
PTPN9-201ENST00000306726 HCN1O60741 890 aa13.69□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms