RNA–Protein interactions for RNA: ENST00000306177.9

USP42-201, Transcript of ubiquitin specific peptidase 42, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP42, Length 5,155 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP42-201ENST00000306177 HPF1Q9NWY4 346 aa15.06■□□□□ 0
USP42-201ENST00000306177 DNMT3BQ9UBC3 853 aaKnown RBP15.06■□□□□ 0
USP42-201ENST00000306177 SCN7AQ01118 1682 aa15.06■□□□□ 0
USP42-201ENST00000306177 GON4LQ3T8J9 2241 aa15.06■□□□□ 0
USP42-201ENST00000306177 PPP1R3DO95685 299 aa15.06■□□□□ 0
USP42-201ENST00000306177 DEFA5Q01523 94 aa15.06■□□□□ 0
USP42-201ENST00000306177 NFATC3Q12968 1075 aa15.06■□□□□ 0
USP42-201ENST00000306177 CDK5R2Q13319 367 aa15.06■□□□□ 0
USP42-201ENST00000306177 TSC22D1Q15714 1073 aa15.06■□□□□ 0
USP42-201ENST00000306177 PLEKHN1Q494U1 663 aaPredicted RBP15.06■□□□□ 0
USP42-201ENST00000306177 DCDC5Q6ZRR9 648 aa15.06■□□□□ 0
USP42-201ENST00000306177 PAPD5Q8NDF8 572 aaKnown RBP15.06■□□□□ 0
USP42-201ENST00000306177 ZNF700Q9H0M5 742 aa15.06■□□□□ 0
USP42-201ENST00000306177 ZNF701Q9NV72 531 aaPredicted RBP15.06■□□□□ 0
USP42-201ENST00000306177 IL20RAQ9UHF4 553 aa15.06■□□□□ 0
USP42-201ENST00000306177 NUFIP1Q9UHK0 495 aaKnown RBP15.06■□□□□ 0
USP42-201ENST00000306177 ELOAQ14241 798 aaKnown RBP15.06■□□□□ 0
USP42-201ENST00000306177 TMPPEQ6ZT21 453 aa15.06■□□□□ 0
USP42-201ENST00000306177 PITX2Q99697 317 aa15.06■□□□□ 0
USP42-201ENST00000306177 SLC6A16Q9GZN6 736 aa15.06■□□□□ 0
USP42-201ENST00000306177 KCNIP3Q9Y2W7 256 aa15.06■□□□□ 0
USP42-201ENST00000306177 PRSS38A1L453 326 aa15.06■□□□□ 0
USP42-201ENST00000306177 C17orf105B2RV13 164 aa15.06■□□□□ 0
USP42-201ENST00000306177 TSPAN4O14817 238 aa15.06■□□□□ 0
USP42-201ENST00000306177 CD3GP09693 182 aa15.06■□□□□ 0
USP42-201ENST00000306177 PNMTP11086 282 aa15.06■□□□□ 0
USP42-201ENST00000306177 ZNF16P17020 682 aaPredicted RBP15.06■□□□□ 0
USP42-201ENST00000306177 SLC6A8P48029 635 aa15.06■□□□□ 0
USP42-201ENST00000306177 CTBP2P56545 445 aa15.06■□□□□ 0
USP42-201ENST00000306177 NCS1P62166 190 aa15.06■□□□□ 0
USP42-201ENST00000306177 ZNF100Q8IYN0 542 aa15.06■□□□□ 0
USP42-201ENST00000306177 ASB15Q8WXK1 588 aa15.06■□□□□ 0
USP42-201ENST00000306177 HOXB13Q92826 284 aaPredicted RBP15.06■□□□□ 0
USP42-201ENST00000306177 CNIH4Q9P003 139 aa15.06■□□□□ 0
USP42-201ENST00000306177 PET100P0DJ07 73 aa15.05■□□□□ 0
USP42-201ENST00000306177 RAB3BP20337 219 aa15.05■□□□□ 0
USP42-201ENST00000306177 STT3AP46977 705 aa15.05■□□□□ 0
USP42-201ENST00000306177 NR0B1P51843 470 aaKnown RBP15.05■□□□□ 0
USP42-201ENST00000306177 MGAT3Q09327 533 aa15.05■□□□□ 0
USP42-201ENST00000306177 CCSAPQ6IQ19 270 aaPredicted RBP15.05■□□□□ 0
USP42-201ENST00000306177 UGT2A3Q6UWM9 527 aa15.05■□□□□ 0
USP42-201ENST00000306177 SSX6Q7RTT6 188 aa15.05■□□□□ 0
USP42-201ENST00000306177 GPR137CQ8N3F9 429 aa15.05■□□□□ 0
USP42-201ENST00000306177 NT5C3BQ969T7 300 aa15.05■□□□□ 0
USP42-201ENST00000306177 ZNF350Q9GZX5 532 aa15.05■□□□□ 0
USP42-201ENST00000306177 C2orf42Q9NWW7 574 aa15.05■□□□□ 0
USP42-201ENST00000306177 HS3ST2Q9Y278 367 aa15.05■□□□□ 0
USP42-201ENST00000306177 SGK494L7N484 410 aa15.05■□□□□ 0
USP42-201ENST00000306177 ZNF765Q7L2R6 523 aa15.05■□□□□ 0
USP42-201ENST00000306177 SHFQ7M4L6 423 aa15.05■□□□□ 0
USP42-201ENST00000306177 FTMTQ8N4E7 242 aa15.05■□□□□ 0
USP42-201ENST00000306177 POGLUT1Q8NBL1 392 aa15.05■□□□□ 0
USP42-201ENST00000306177 OR5D16Q8NGK9 328 aa15.05■□□□□ 0
USP42-201ENST00000306177 TOE1Q96GM8 510 aaKnown RBP15.05■□□□□ 0
USP42-201ENST00000306177 CCDC32Q9BV29 185 aa15.05■□□□□ 0
USP42-201ENST00000306177 ABCG5Q9H222 651 aa15.05■□□□□ 0
USP42-201ENST00000306177 CWH43Q9H720 699 aa15.05■□□□□ 0
USP42-201ENST00000306177 A0A0A6YYC8 382 aaPredicted RBP15.05■□□□□ -0
USP42-201ENST00000306177 HHLA1C9JL84 531 aa15.05■□□□□ -0
USP42-201ENST00000306177 I3L1I5 382 aaPredicted RBP15.05■□□□□ -0
USP42-201ENST00000306177 TFPTP0C1Z6 253 aa15.05■□□□□ -0
USP42-201ENST00000306177 GGT2P36268 569 aa15.05■□□□□ -0
USP42-201ENST00000306177 GJA8P48165 433 aa15.05■□□□□ -0
USP42-201ENST00000306177 MAN2A2P49641 1150 aa15.05■□□□□ -0
USP42-201ENST00000306177 CHFRQ96EP1 664 aa15.05■□□□□ -0
USP42-201ENST00000306177 UBXN10Q96LJ8 280 aa15.05■□□□□ -0
USP42-201ENST00000306177 ARHGAP9Q9BRR9 750 aa15.05■□□□□ -0
USP42-201ENST00000306177 CIB4A0PJX0 185 aa15.05■□□□□ -0
USP42-201ENST00000306177 MAS1P04201 325 aa15.05■□□□□ -0
USP42-201ENST00000306177 ERP29P30040 261 aaKnown RBP15.05■□□□□ -0
USP42-201ENST00000306177 SFXN5Q8TD22 340 aa15.05■□□□□ -0
USP42-201ENST00000306177 MYLIPQ8WY64 445 aa15.05■□□□□ -0
USP42-201ENST00000306177 RABL2AQ9UBK7 228 aaPredicted RBP15.05■□□□□ -0
USP42-201ENST00000306177 FBXL3Q9UKT7 428 aa15.05■□□□□ -0
USP42-201ENST00000306177 RABL2BQ9UNT1 228 aa15.05■□□□□ -0
USP42-201ENST00000306177 TCRBV3S1A0A5B6 114 aa15.04■□□□□ -0
USP42-201ENST00000306177 SEC14L5O43304 696 aa15.04■□□□□ -0
USP42-201ENST00000306177 OTX2P32243 289 aa15.04■□□□□ -0
USP42-201ENST00000306177 ART1P52961 327 aa15.04■□□□□ -0
USP42-201ENST00000306177 DEFB133Q30KQ1 61 aa15.04■□□□□ -0
USP42-201ENST00000306177 DCP2Q8IU60 420 aaKnown RBP15.04■□□□□ -0
USP42-201ENST00000306177 UEVLDQ8IX04 471 aa15.04■□□□□ -0
USP42-201ENST00000306177 ZSCAN1Q8NBB4 408 aa15.04■□□□□ -0
USP42-201ENST00000306177 TREM1Q9NP99 234 aa15.04■□□□□ -0
USP42-201ENST00000306177 URB1O60287 2271 aaKnown RBP15.04■□□□□ -0
USP42-201ENST00000306177 A6NCN8 305 aa15.04■□□□□ -0
USP42-201ENST00000306177 ERVFC1P60507 584 aa15.04■□□□□ -0
USP42-201ENST00000306177 MALLQ13021 153 aa15.04■□□□□ -0
USP42-201ENST00000306177 SNTB2Q13425 540 aaKnown RBP15.04■□□□□ -0
USP42-201ENST00000306177 PGBD5Q8N414 524 aa15.04■□□□□ -0
USP42-201ENST00000306177 TMEM239Q8WW34 195 aa15.04■□□□□ -0
USP42-201ENST00000306177 FAM46BQ96A09 425 aa15.04■□□□□ -0
USP42-201ENST00000306177 PRRC1Q96M27 445 aa15.04■□□□□ -0
USP42-201ENST00000306177 OR4K3Q96R72 315 aa15.04■□□□□ -0
USP42-201ENST00000306177 RTP3Q9BQQ7 232 aa15.04■□□□□ -0
USP42-201ENST00000306177 ZNF471Q9BX82 626 aaPredicted RBP15.04■□□□□ -0
USP42-201ENST00000306177 KCMF1Q9P0J7 381 aa15.04■□□□□ -0
USP42-201ENST00000306177 ATXN7L1Q9ULK2 861 aaPredicted RBP15.04■□□□□ -0
USP42-201ENST00000306177 MAGED1Q9Y5V3 778 aaPredicted RBP15.04■□□□□ -0
USP42-201ENST00000306177 KIAA0100Q14667 2235 aaKnown RBP15.04■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms