RNA–Protein interactions for RNA: ENST00000305866.9

VPS50-202, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VPS50, Length 3,613 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-202ENST00000305866 E9PI62 339 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 BHLHE40O14503 412 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 CTDSPLO15194 276 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 TSPAN6O43657 245 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 HPXP02790 462 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 ADRB1P08588 477 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 ANXA4P09525 319 aaPredicted RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 GLULP15104 373 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 TRIM23P36406 574 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 SLC1A3P43003 542 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 PPP3R1P63098 170 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 IRF8Q02556 426 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 TMEM35AQ53FP2 167 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 ATAT1Q5SQI0 421 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 UNQ9370/PRO34162Q6UXP9 181 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 UBE2Q1Q7Z7E8 422 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 TMEM25Q86YD3 366 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 OR4A15Q8NGL6 344 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 OR6K2Q8NGY2 324 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 OR2T4Q8NH00 348 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 OR5K2Q8NHB8 316 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 APOL5Q9BWW9 433 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 SGK2Q9HBY8 427 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 C11orf16Q9NQ32 467 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 TDP1Q9NUW8 608 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 MED17Q9NVC6 651 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 MRPL39Q9NYK5 338 aaKnown RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 TMCC3Q9ULS5 477 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 PCDHGA9Q9Y5G4 932 aaKnown RBP5.09□□□□□ -1.59
VPS50-202ENST00000305866 KCNE3Q9Y6H6 103 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 KCNE2Q9Y6J6 123 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 FANCMQ8IYD8 2048 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 SCN2AQ99250 2005 aa5.09□□□□□ -1.59
VPS50-202ENST00000305866 IRGMA1A4Y4 181 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 CDC42EP2O14613 210 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 ZNF749O43361 778 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 MMP20O60882 483 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 TMCC2O75069 709 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 CLEC3AO75596 197 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 LEFTY1O75610 366 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 RFPL3O75679 317 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 SOX14O95416 240 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 PDGFAP04085 211 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 SMIM10L1P0DMW3 83 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 NPR2P20594 1047 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 GABRR2P28476 465 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 S100A5P33763 92 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 IDH2P48735 452 aaKnown RBP5.09□□□□□ -1.6
VPS50-202ENST00000305866 CCT3P49368 545 aaKnown RBP5.09□□□□□ -1.6
VPS50-202ENST00000305866 ZNF136P52737 540 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 TBPL1P62380 186 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 POU6F2P78424 691 aaPredicted RBP5.09□□□□□ -1.6
VPS50-202ENST00000305866 ACSM2AQ08AH3 577 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 IL10RAQ13651 578 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 TIMM50Q3ZCQ8 353 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 ACSM2BQ68CK6 577 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 RAET1GQ6H3X3 334 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 REEP3Q6NUK4 255 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 PARS2Q7L3T8 475 aaKnown RBP5.09□□□□□ -1.6
VPS50-202ENST00000305866 OLIG3Q7RTU3 272 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 SHISA5Q8N114 240 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 STX19Q8N4C7 294 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 RFLNBQ8N5W9 214 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 MRPL43Q8N983 215 aaKnown RBP5.09□□□□□ -1.6
VPS50-202ENST00000305866 GALNT11Q8NCW6 608 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 OR6T1Q8NGN1 323 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 OR52N1Q8NH53 320 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 SMIM10Q96HG1 83 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 EGLN3Q9H6Z9 239 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 MAT2BQ9NZL9 334 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 KLHL20Q9Y2M5 609 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 ASB4Q9Y574 426 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 ADAMTS9Q9P2N4 1935 aa5.09□□□□□ -1.6
VPS50-202ENST00000305866 MGAT4DA6NG13 374 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 TMPRSS11DO60235 418 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 OR2B3O76000 313 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 EPHX1P07099 455 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 FGF2P09038 288 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ACP5P13686 325 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 SOX6P35712 828 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ARPP19P56211 112 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 SMIM11AP58511 58 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ZNF85Q03923 595 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 DBPQ10586 325 aaPredicted RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 EXOSC2Q13868 293 aaKnown RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 NDUFAF5Q5TEU4 345 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 KHDRBS2Q5VWX1 349 aaKnown RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 FAM199XQ6PEV8 388 aaPredicted RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 ZNF322Q6U7Q0 402 aaPredicted RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 PTCHD4Q6ZW05 846 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 MED25Q71SY5 747 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 CCDC28AQ8IWP9 274 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 OR4D9Q8NGE8 314 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 NT5CQ8TCD5 201 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 RAET1EQ8TD07 263 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ZFPM2Q8WW38 1151 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 OIT3Q8WWZ8 545 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 ZNF707Q96C28 371 aaPredicted RBP5.08□□□□□ -1.6
VPS50-202ENST00000305866 TMEM19Q96HH6 336 aa5.08□□□□□ -1.6
VPS50-202ENST00000305866 RIOK2Q9BVS4 552 aaKnown RBP5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms