RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 NKX1-2Q9UD57 310 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 TMED5Q9Y3A6 229 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF749O43361 778 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF623O75123 536 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SERPINA2P20848 420 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 MAOAP21397 527 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 MBTPS1Q14703 1052 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF791Q3KP31 576 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 HSD17B12Q53GQ0 312 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 NETO1Q8TDF5 533 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 HOXB13Q92826 284 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF649Q9BS31 505 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 SLC29A3Q9BZD2 475 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 HSD3B7Q9H2F3 369 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF71Q9NQZ8 489 aaPredicted RBP7.37□□□□□ -1.23
SCN9A-201ENST00000303354 TMEM184CQ9NVA4 438 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 HIF1ANQ9NWT6 349 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 EXTL2Q9UBQ6 330 aa7.37□□□□□ -1.23
SCN9A-201ENST00000303354 FTCDNL1E5RQL4 147 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 PRDX3P30048 256 aaKnown RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 MAGEA8P43361 318 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 EIF2S3LQ2VIR3 472 aaKnown RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 ANKK1Q8NFD2 765 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 PTERQ96BW5 349 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 IER3IP1Q9Y5U9 82 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 SLIT3O75094 1523 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 MITFO75030 526 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 PVALBP20472 110 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 EMP3P54852 163 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 E2F1Q01094 437 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 CAMK2DQ13557 499 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 OR8B8Q15620 311 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 EEF1AKMT2Q5JPI9 291 aaKnown RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF662Q6ZS27 426 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 MRPL10Q7Z7H8 261 aaKnown RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 OR1J4Q8NGS1 313 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 ANKRD30BLA7E2S9 258 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 GSTM3P21266 225 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 HK3P52790 923 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 IST1P53990 364 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 LETMD1Q6P1Q0 360 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 BHLHE23Q8NDY6 225 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 OR2T33Q8NG76 320 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 SCGB1C1Q8TD33 95 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 NANOS1Q8WY41 292 aaKnown RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 TRIB1Q96RU8 372 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 MYADMQ96S97 322 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF559Q9BR84 538 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 RAB26Q9ULW5 256 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 C10orf71Q711Q0 1435 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 LILRB3O75022 631 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 THBS2P35442 1172 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 SH3BP2P78314 561 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 DUSP2Q05923 314 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 NADSYN1Q6IA69 706 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 B3GLCTQ6Y288 498 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 FAM83HQ6ZRV2 1179 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 OR1N1Q8NGS0 311 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 GPR150Q8NGU9 434 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 UTP23Q9BRU9 249 aaKnown RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 SLC2A11Q9BYW1 496 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 WDR12Q9GZL7 423 aaKnown RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 FAM124BQ9H5Z6 455 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 NUDT15Q9NV35 164 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 KCNIP1Q9NZI2 227 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 UBE2J1Q9Y385 318 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 ALG5Q9Y673 324 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 LTN1O94822 1766 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 DISC1C4P0D8 188 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 RPE65Q16518 533 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF630Q2M218 657 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 TMEM240Q5SV17 173 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 OR52E8Q6IFG1 317 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 SYCE2Q6PIF2 218 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 KDM8Q8N371 416 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 ACOT4Q8N9L9 421 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 CCDC74AQ96AQ1 378 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 SCRN2Q96FV2 425 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 C14orf119Q9NWQ9 140 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 NOSIPQ9Y314 301 aaKnown RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 ST14Q9Y5Y6 855 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 FGF3P11487 239 aaPredicted RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 ACPPP15309 386 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 ZNF44P15621 663 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 UGT2B7P16662 529 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 HNRNPA1L2Q32P51 320 aaKnown RBP7.36□□□□□ -1.23
SCN9A-201ENST00000303354 SAMD12Q8N8I0 201 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 SLC37A3Q8NCC5 494 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 MUCL1Q96DR8 90 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 KLHL15Q96M94 604 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 PINK1Q9BXM7 581 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 DCSTAMPQ9H295 470 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 TAS2R10Q9NYW0 307 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 CCRL2O00421 344 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 SNAP29O95721 258 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 DPP6P42658 865 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 AKR1C2P52895 323 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 DCST2Q5T1A1 773 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 GLT8D1Q68CQ7 371 aa7.36□□□□□ -1.23
SCN9A-201ENST00000303354 CROCCP3Q8IVE0 287 aa7.36□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms