RNA–Protein interactions for RNA: ENST00000302303.5

RFX3-201, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 1,522 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-201ENST00000302303 HTR1EP28566 365 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 PTGDSP41222 190 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 SOX3P41225 446 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 TMPRSS3P57727 454 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 POU6F2P78424 691 aaPredicted RBP8.73□□□□□ -1.01
RFX3-201ENST00000302303 TXNL4AP83876 142 aaKnown RBP8.73□□□□□ -1.01
RFX3-201ENST00000302303 MXRA7P84157 204 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 CDK6Q00534 326 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 CHRNEQ04844 493 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 CPEB4Q17RY0 729 aaKnown RBP eCLIP8.73□□□□□ -1.01
RFX3-201ENST00000302303 LINC00303Q3SY05 128 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 RPS26P11Q5JNZ5 115 aaPredicted RBP8.73□□□□□ -1.01
RFX3-201ENST00000302303 LRRC69Q6ZNQ3 347 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 PTRH1Q86Y79 214 aaKnown RBP8.73□□□□□ -1.01
RFX3-201ENST00000302303 HPS6Q86YV9 775 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 SLC34A3Q8N130 599 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 BEST3Q8N1M1 668 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 SLC15A4Q8N697 577 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 NFKBIDQ8NI38 313 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 JADE3Q92613 823 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 DIO2Q92813 273 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 EFHD2Q96C19 240 aaPredicted RBP8.73□□□□□ -1.01
RFX3-201ENST00000302303 OMA1Q96E52 524 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 RMND5BQ96G75 393 aaPredicted RBP8.73□□□□□ -1.01
RFX3-201ENST00000302303 TMEM19Q96HH6 336 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 TRNT1Q96Q11 434 aaKnown RBP8.73□□□□□ -1.01
RFX3-201ENST00000302303 TREX2Q9BQ50 279 aaPredicted RBP8.73□□□□□ -1.01
RFX3-201ENST00000302303 THTPAQ9BU02 230 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 QRSL1Q9H0R6 528 aaKnown RBP8.73□□□□□ -1.01
RFX3-201ENST00000302303 PCDHAC1Q9H158 963 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 RAD21L1Q9H4I0 556 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 PRORYQ9H606 182 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 BCL2L10Q9HD36 194 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 Q9N2J8 555 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 NDE1Q9NXR1 346 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 STMN3Q9NZ72 180 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 ADA2Q9NZK5 511 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 PRPF19Q9UMS4 504 aaKnown RBP8.73□□□□□ -1.01
RFX3-201ENST00000302303 CORO2BQ9UQ03 480 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 HRH3Q9Y5N1 445 aa8.73□□□□□ -1.01
RFX3-201ENST00000302303 NBEAQ8NFP9 2946 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 NPIPA5A0A0B4J1W7 369 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 NPIPA7E9PJI5 369 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 FADS1O60427 444 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 DNAJA2O60884 412 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 PPM1BO75688 479 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 UGT2B17O75795 530 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 SOX30O94993 753 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 EPPINO95925 133 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 BCHEP06276 602 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 NPIPA8P0DM63 369 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 CYP4B1P13584 511 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 NAGAP17050 411 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 RPS4Y1P22090 263 aaKnown RBP8.72□□□□□ -1.01
RFX3-201ENST00000302303 PCGF2P35227 344 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 CD96P40200 585 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 PNLIPRP2P54317 469 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 UCNP55089 124 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 FBXW4P57775 412 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 KCNJ2P63252 427 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 RBBP4Q09028 425 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 VEZF1Q14119 521 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 ZNHIT3Q15649 155 aaPredicted RBP8.72□□□□□ -1.01
RFX3-201ENST00000302303 NTRK2Q16620 822 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 MEP1AQ16819 746 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 DNAL1Q4LDG9 190 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 CRB2Q5IJ48 1285 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 SAMD4BQ5PRF9 694 aaKnown RBP8.72□□□□□ -1.01
RFX3-201ENST00000302303 GCNT6Q5T4J0 391 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 BROXQ5VW32 411 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 LRRC74BQ6ZQY2 392 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 CCDC80Q76M96 950 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 MDGA2Q7Z553 956 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 COMTD1Q86VU5 262 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 IFNEQ86WN2 208 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 MICU2Q8IYU8 434 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 FBXW8Q8N3Y1 598 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 SLC5A8Q8N695 610 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 COX18Q8N8Q8 333 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 OR2T12Q8NG77 320 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 APOBEC4Q8WW27 367 aaKnown RBP8.72□□□□□ -1.01
RFX3-201ENST00000302303 ZNF354BQ96LW1 612 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 SIGLEC12Q96PQ1 595 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 NODALQ96S42 347 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 ADOQ96SZ5 270 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 SMAD5Q99717 465 aaKnown RBP8.72□□□□□ -1.01
RFX3-201ENST00000302303 SPATA9Q9BWV2 254 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 THUMPD1Q9NXG2 353 aaKnown RBP8.72□□□□□ -1.01
RFX3-201ENST00000302303 GPR83Q9NYM4 423 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 PLA2G3Q9NZ20 509 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 SLC7A8Q9UHI5 535 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 MKLN1Q9UL63 735 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 LIPT1Q9Y234 373 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 L3MBTL1Q9Y468 752 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 CSAG2Q9Y5P2 127 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 CHCHD2Q9Y6H1 151 aaPredicted RBP8.72□□□□□ -1.01
RFX3-201ENST00000302303 ITPR1Q14643 2758 aa8.72□□□□□ -1.01
RFX3-201ENST00000302303 ELOVL7A1L3X0 281 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 OR6C70A6NIJ9 312 aa8.71□□□□□ -1.01
RFX3-201ENST00000302303 C17orf51A8MQB3 221 aa8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 59.5 ms