RNA–Protein interactions for RNA: ENST00000300862.7

HIF3A-204, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene HIF3A, Length 2,551 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-204ENST00000300862 SMUG1Q53HV7 270 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 TYW3Q6IPR3 259 aaKnown RBP12.08□□□□□ -0.48
HIF3A-204ENST00000300862 BHLHB9Q6PI77 547 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 FAM111BQ6SJ93 734 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 B3GLCTQ6Y288 498 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 TMEM64Q6YI46 380 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 RRM2BQ7LG56 351 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 C16orf62Q7Z3J2 963 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 LAPTM4BQ86VI4 370 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 UBE2J2Q8N2K1 259 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 CAMKK1Q8N5S9 505 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 SLC16A11Q8NCK7 471 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 OTULINQ96BN8 352 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 PINK1Q9BXM7 581 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 GON4LQ3T8J9 2241 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 CACNB4O00305 520 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-204ENST00000300862 TFECO14948 347 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-204ENST00000300862 EMC8O43402 210 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 PIP5K1CO60331 668 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 C5AR1P21730 350 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 MTNR1AP48039 350 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 INSL4Q14641 139 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 NDUFA9Q16795 377 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 CRTC2Q53ET0 693 aaPredicted RBP12.08□□□□□ -0.48
HIF3A-204ENST00000300862 RAB43Q86YS6 212 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 ANKK1Q8NFD2 765 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 FLCNQ8NFG4 579 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 OR4F15Q8NGB8 312 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 OR56A1Q8NGH5 318 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 SETD6Q8TBK2 473 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 TMEM163Q8TC26 289 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 SLC35A4Q96G79 324 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 ZNF681Q96N22 645 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 SLC17A9Q9BYT1 436 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 TMEM74BQ9NUR3 256 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D29Q9UFV1 150 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 CMAHPQ9Y471 501 aa12.08□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D3DA0A087WVF3 549 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D3IA0A087WXS9 549 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D3EA0A087X179 549 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D3KA0A087X1G2 549 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 CENPVL1A0A0U1RR11 272 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 A0A1W2PQL4 384 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D3FA6NER0 549 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D3LB9A6J9 549 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 UBXN7O94888 489 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 SLC2A10O95528 541 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 LALBAP00709 142 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 THY1P04216 161 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D3HP0C7X1 549 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 CCNYL3P0C7X3 344 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 ZNF888P0CJ79 500 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-204ENST00000300862 ACADMP11310 421 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 CPEP16870 476 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 HOXD11P31277 338 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-204ENST00000300862 WNT4P56705 351 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 ID2Q02363 134 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 ARMC4Q5T2S8 1044 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 CCNJQ5T5M9 372 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D3GQ6DHY5 549 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D3CQ6IPX1 549 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 GDPGP1Q6ZNW5 385 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 YAF2Q8IY57 180 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TBC1D3Q8IZP1 549 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-204ENST00000300862 BBS1Q8NFJ9 593 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 OR7G2Q8NG99 324 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 OR4Q3Q8NH05 313 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 CCL4L1Q8NHW4 92 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 ZCCHC10Q8TBK6 192 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 DIO2Q92813 273 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 SLC25A46Q96AG3 418 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 DCLRE1CQ96SD1 692 aaKnown RBP12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TIMM29Q9BSF4 260 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 MIXL1Q9H2W2 232 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 GIMAP4Q9NUV9 329 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 PLEKHB1Q9UF11 243 aaPredicted RBP12.07□□□□□ -0.48
HIF3A-204ENST00000300862 SLC17A4Q9Y2C5 497 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 ZNF780BQ9Y6R6 833 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 A0A1W2PQ09 198 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 MEIOCA2RUB1 952 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 POM121BA6NF01 834 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 ERVH48-1M5A8F1 160 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 CASC3O15234 703 aaKnown RBP12.07□□□□□ -0.48
HIF3A-204ENST00000300862 PRODHO43272 600 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 NR2F6P10588 404 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 ACP2P11117 423 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 IL7P13232 177 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 GDI1P31150 447 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 ANXA11P50995 505 aaKnown RBP12.07□□□□□ -0.48
HIF3A-204ENST00000300862 RPS21P63220 83 aaKnown RBP12.07□□□□□ -0.48
HIF3A-204ENST00000300862 FAM131AQ6UXB0 335 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 SLC36A4Q6YBV0 504 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 PRR23CQ6ZRP0 262 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 NRMQ8IXM6 262 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TMEFF1Q8IYR6 380 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 SFXN5Q8TD22 340 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 GNPDA2Q8TDQ7 276 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 TMEM255BQ8WV15 326 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 CDS1Q92903 461 aa12.07□□□□□ -0.48
HIF3A-204ENST00000300862 C1QTNF2Q9BXJ5 285 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms