RNA–Protein interactions for RNA: ENST00000299957.10

CASC4-201, Transcript of cancer susceptibility 4, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CASC4, Length 3,962 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-201ENST00000299957 COQ8AQ8NI60 647 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 CDS1Q92903 461 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ZNF354BQ96LW1 612 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 CWH43Q9H720 699 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 BRF2Q9HAW0 419 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 IL21RQ9HBE5 538 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ELOA3DA6NLF2 546 aaPredicted RBP12.53□□□□□ -0.4
CASC4-201ENST00000299957 NARSO43776 548 aaKnown RBP12.53□□□□□ -0.4
CASC4-201ENST00000299957 DNASE1P24855 282 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ITGB8P26012 769 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 SHC1P29353 583 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 STAT5AP42229 794 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 HSF2Q03933 536 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ZNF234Q14588 700 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ELOA3BQ3SY89 546 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 SCGB2B2Q4G0G5 96 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 OLFML2AQ68BL7 652 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 RPTNQ6XPR3 784 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ELOA3Q8NG57 546 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 TET1Q8NFU7 2136 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 SLC25A12O75746 678 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 TFPIP10646 304 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ZNF3P17036 446 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 TGFBR2P37173 567 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 CCR2P41597 374 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 GBX2P52951 348 aaPredicted RBP12.53□□□□□ -0.4
CASC4-201ENST00000299957 TCTN3Q6NUS6 607 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ZNF627Q7L945 461 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 PROKR2Q8NFJ6 384 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 OR4K14Q8NGD5 310 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 GNPDA2Q8TDQ7 276 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 FKBP10Q96AY3 582 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ISG20Q96AZ6 181 aaKnown RBP12.53□□□□□ -0.4
CASC4-201ENST00000299957 ORAI1Q96D31 301 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 DTD2Q96FN9 168 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ALG8Q9BVK2 526 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 ATG4BQ9Y4P1 393 aa12.53□□□□□ -0.4
CASC4-201ENST00000299957 TRBV2A0A0J9YWF9 115 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 MCIDASD6RGH6 385 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 EIF1AYO14602 144 aaKnown RBP12.52□□□□□ -0.4
CASC4-201ENST00000299957 MT-ND5P03915 603 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 IGFBP4P22692 258 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 GIFP27352 417 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 GNALP38405 381 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 SLC6A12P48065 614 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 SRP9P49458 86 aaKnown RBP12.52□□□□□ -0.4
CASC4-201ENST00000299957 PPP3R1P63098 170 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 SHC2P98077 582 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 PON3Q15166 354 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 AMZ1Q400G9 498 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 MEDAGQ5VYS4 303 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 NAXEQ8NCW5 288 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 SDR9C7Q8NEX9 313 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 OR56A1Q8NGH5 318 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 SUN3Q8TAQ9 357 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 CHTF18Q8WVB6 975 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 AKAP1Q92667 903 aaKnown RBP eCLIP12.52□□□□□ -0.4
CASC4-201ENST00000299957 MRPL48Q96GC5 212 aaKnown RBP12.52□□□□□ -0.4
CASC4-201ENST00000299957 AHCYL2Q96HN2 611 aaKnown RBP12.52□□□□□ -0.4
CASC4-201ENST00000299957 B3GNT4Q9C0J1 378 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 CENPMQ9NSP4 180 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 HS3ST2Q9Y278 367 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 SCN2AQ99250 2005 aa12.52□□□□□ -0.4
CASC4-201ENST00000299957 NRXN2Q9P2S2 1712 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 AKR7A2O43488 359 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 TMPRSS11DO60235 418 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 DOK2O60496 412 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 VNN2O95498 520 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 PCMT1P22061 227 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 PRLHRP49683 370 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 WNT3P56703 355 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 CCDC71Q8IV32 467 aaPredicted RBP12.52□□□□□ -0.41
CASC4-201ENST00000299957 MFSD4AQ8N468 514 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 OR5H6Q8NGV6 325 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 LILRB4Q8NHJ6 448 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 SLC41A3Q96GZ6 507 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 ADAD1Q96M93 576 aaKnown RBP12.52□□□□□ -0.41
CASC4-201ENST00000299957 BCL7BQ9BQE9 202 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 CCDC32Q9BV29 185 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 KLHL31Q9H511 634 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 GRIP1Q9Y3R0 1128 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 OR6C74A6NCV1 312 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 HEPACAM2A8MVW5 462 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 FLRT2O43155 660 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 FCMRO60667 390 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 MAS1P04201 325 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 PSMD4P55036 377 aaKnown RBP12.52□□□□□ -0.41
CASC4-201ENST00000299957 LIM2P55344 173 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 ERV3-1Q14264 604 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 MSANTD1Q6ZTZ1 278 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 NKAIN4Q8IVV8 208 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 FRMD1Q8N878 549 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 PHOSPHO1Q8TCT1 267 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 CNDP2Q96KP4 475 aaKnown RBP12.52□□□□□ -0.41
CASC4-201ENST00000299957 GLIPR2Q9H4G4 154 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 SYNPO2LQ9H987 977 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 PNO1Q9NRX1 252 aaKnown RBP12.52□□□□□ -0.41
CASC4-201ENST00000299957 FARSAQ9Y285 508 aaKnown RBP12.52□□□□□ -0.41
CASC4-201ENST00000299957 PADI2Q9Y2J8 665 aa12.52□□□□□ -0.41
CASC4-201ENST00000299957 EXOSC1Q9Y3B2 195 aaKnown RBP12.52□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms