RNA–Protein interactions for RNA: ENST00000298396.6

SSX3-201, Transcript of SSX family member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSX3, Length 1,232 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSX3-201ENST00000298396 ZFP90Q8TF47 636 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 NTNG2Q96CW9 530 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 ERP27Q96DN0 273 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 AURKBQ96GD4 344 aaPredicted RBP5.44□□□□□ -1.54
SSX3-201ENST00000298396 MAGED4Q96JG8 741 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 BBC3Q96PG8 261 aaPredicted RBP5.44□□□□□ -1.54
SSX3-201ENST00000298396 BTBD9Q96Q07 612 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 OR52E6Q96RD3 313 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 ZBTB18Q99592 522 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 YIPF4Q9BSR8 244 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 LMF2Q9BU23 707 aaKnown RBP5.44□□□□□ -1.54
SSX3-201ENST00000298396 DEFB126Q9BYW3 111 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 TRIM8Q9BZR9 551 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 NSRP1Q9H0G5 558 aaKnown RBP5.44□□□□□ -1.54
SSX3-201ENST00000298396 CDCP1Q9H5V8 836 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 SH2D2AQ9NP31 389 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 EQTNQ9NQ60 294 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 ATAD3AQ9NVI7 634 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 ARL8BQ9NVJ2 186 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 TMEM45AQ9NWC5 275 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 TAS2R9Q9NYW1 312 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 PLA2G3Q9NZ20 509 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 VAPAQ9P0L0 249 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 PTGFRNQ9P2B2 879 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 BCAP29Q9UHQ4 241 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 MAPRE3Q9UPY8 281 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 TP53TG5Q9Y2B4 290 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 GPR55Q9Y2T6 319 aaPredicted RBP5.44□□□□□ -1.54
SSX3-201ENST00000298396 ARL2BPQ9Y2Y0 163 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 PCDHGA9Q9Y5G4 932 aaKnown RBP5.44□□□□□ -1.54
SSX3-201ENST00000298396 U3KQE9 123 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 MED12LQ86YW9 2145 aa5.44□□□□□ -1.54
SSX3-201ENST00000298396 DIDO1Q9BTC0 2240 aaKnown RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 A0A096LPI6 279 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 A0A0G2JMM0 328 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 RNF103-CHMP3A0A140T963 221 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 A0A1W2PP18 115 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 A0A1W2PPB8 328 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 A0A1W2PRS3 328 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 CCDC154A6NI56 674 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 OR6C76A6NM76 312 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 A8MUI8 341 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 KIR3DP1A8MWS1 328 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 KIAA1324LA8MWY0 1029 aaPredicted RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 B4DXG7 233 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 SLC22A2O15244 555 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 CFLARO15519 480 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 PRAMEF2O60811 474 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 ERN1O75460 977 aaKnown RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 ITGA10O75578 1167 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 OR6B1O95007 311 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 UNC5CO95185 931 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 WDPCPO95876 746 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 ALPPP05187 535 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 SNRPB2P08579 225 aaKnown RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 COX4I1P13073 169 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 ICAM2P13598 275 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 UQCRC2P22695 453 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 TRHRP34981 398 aaPredicted RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 SOX3P41225 446 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 CCT3P49368 545 aaKnown RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 KCNK10P57789 538 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 IRX1P78414 480 aaPredicted RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 ZNF155Q12901 538 aaPredicted RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 KCNAB2Q13303 367 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 MFAP5Q13361 173 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 TUBA3CQ13748 450 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 LY6DQ14210 128 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 ESPL1Q14674 2120 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 LASP1Q14847 261 aaKnown RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 DUSP5Q16690 384 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 ZNF791Q3KP31 576 aaPredicted RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 CRB2Q5IJ48 1285 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 COLEC12Q5KU26 742 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 ACER2Q5QJU3 275 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 ANXA8L1Q5VT79 327 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 REP15Q6BDI9 236 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 C8orf82Q6P1X6 216 aaPredicted RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 TUBA3EQ6PEY2 450 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 HSDL2Q6YN16 418 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 LINC00696Q6ZRV3 163 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 C6orf120Q7Z4R8 191 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 RPS19BP1Q86WX3 136 aaKnown RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 RNF130Q86XS8 419 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 PRR22Q8IZ63 422 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 DPP10Q8N608 796 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 FITM2Q8N6M3 262 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 NATD1Q8N6N6 113 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 HORMAD2Q8N7B1 307 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 RBMXL3Q8N7X1 1067 aaKnown RBP5.43□□□□□ -1.54
SSX3-201ENST00000298396 FAM169BQ8N8A8 192 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 SLC16A11Q8NCK7 471 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 MDS2Q8NDY4 140 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 OR5D16Q8NGK9 328 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 MIPOL1Q8TD10 442 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 TSPEARQ8WU66 669 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 RNF138Q8WVD3 245 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 RNF141Q8WVD5 230 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 PIK3R3Q92569 461 aa5.43□□□□□ -1.54
SSX3-201ENST00000298396 RCN3Q96D15 328 aa5.43□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms