RNA–Protein interactions for RNA: ENST00000298317.8

RPUSD4-201, Transcript of RNA pseudouridylate synthase domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPUSD4, Length 2,512 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPUSD4-201ENST00000298317 RNF13O43567 381 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 SSNA1O43805 119 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 TBL1XO60907 577 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 TOXO94900 526 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 IL3P08700 152 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 IRF1P10914 325 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 F8A1P23610 371 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 CSNK1DP48730 415 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 CCR6P51684 374 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 PTSQ03393 145 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 ZNF322Q6U7Q0 402 aaPredicted RBP12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 RSPO2Q6UXX9 243 aaPredicted RBP12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 MMP21Q8N119 569 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 WFDC5Q8TCV5 224 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 MRPS31Q92665 395 aaKnown RBP12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 SCRN2Q96FV2 425 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 FNDC11Q9BVV2 318 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 METTL17Q9H7H0 456 aaPredicted RBP12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 ZNF275Q9NSD4 429 aaPredicted RBP12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 MARK1Q9P0L2 795 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 SEC14L3Q9UDX4 400 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 RASD1Q9Y272 281 aa12.69□□□□□ -0.38
RPUSD4-201ENST00000298317 CARNS1A5YM72 827 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 ZNF840PA6NDX5 716 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 MMP20O60882 483 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 BDH1Q02338 343 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 GRM7Q14831 915 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 IER5LQ5T953 404 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 AADACL4Q5VUY2 407 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 RETSATQ6NUM9 610 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 SFXN4Q6P4A7 337 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 GLB1LQ6UWU2 654 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 C3P1Q6ZMU1 363 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 KLBQ86Z14 1044 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 OR56B4Q8NH76 319 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 RPLP0P6Q8NHW5 317 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 ASZ1Q8WWH4 475 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 RAB8BQ92930 207 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 SFXN2Q96NB2 322 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 C7orf50Q9BRJ6 194 aaKnown RBP12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 JAM3Q9BX67 310 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 ACTR6Q9GZN1 396 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 PTGFRNQ9P2B2 879 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 SLC16A8O95907 504 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 TGFB1P01137 390 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 HPXP02790 462 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 NMBP08949 121 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 CD3GP09693 182 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 C4BPBP20851 252 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 THPOP40225 353 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 TSPAN5P62079 268 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 UAP1L1Q3KQV9 507 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 CLLU1OSQ5K130 101 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 TBC1D19Q8N5T2 526 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 FOXJ1Q92949 421 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 RFKQ969G6 155 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 VOPP1Q96AW1 172 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 CXorf58Q96LI9 332 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 C12orf66Q96MD2 445 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 ZNF607Q96SK3 696 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 DDOQ99489 341 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 C12orf57Q99622 126 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 BRD7Q9NPI1 651 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 SCN10AQ9Y5Y9 1956 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 DOCK6Q96HP0 2047 aa12.68□□□□□ -0.38
RPUSD4-201ENST00000298317 ANKDD1BA6NHY2 528 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 HMGN4O00479 90 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 FZD7O75084 574 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 MTX2O75431 263 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 KLK1P06870 262 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 ACP5P13686 325 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 MAPK9P45984 424 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 MMP15P51511 669 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 TCTE1Q5JU00 501 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 FAM180BQ6P0A1 224 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 LRFN4Q6PJG9 635 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 CDH26Q8IXH8 852 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 ZNF527Q8NB42 609 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 FOPNLQ96NB1 174 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 CD93Q9NPY3 652 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 SLAMF7Q9NQ25 335 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 MIEF1Q9NQG6 463 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 NLGN3Q9NZ94 848 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 ING1Q9UK53 422 aaPredicted RBP12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 COPS3Q9UNS2 423 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 BAIAP2Q9UQB8 552 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 CKAP5Q14008 2032 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 A0A0G2JK05 382 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 NPC1O15118 1278 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 B4GALT2O60909 372 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 RAB3AP20336 220 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 MAOBP27338 520 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 SERPINA4P29622 427 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 SLBPQ14493 270 aaKnown RBP eCLIP12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 FAM110CQ1W6H9 321 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 TMEM44Q2T9K0 475 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 FAM198BQ6UWH4 519 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 TRMT10AQ8TBZ6 339 aaKnown RBP12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 ECHDC3Q96DC8 303 aa12.67□□□□□ -0.38
RPUSD4-201ENST00000298317 WDR34Q96EX3 536 aa12.67□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms