RNA–Protein interactions for RNA: ENST00000298173.7

GTF2A1-201, Transcript of general transcription factor IIA subunit 1, humanhuman

TSL 2

Gene GTF2A1, Length 1,677 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2A1-201ENST00000298173 RMND5BQ96G75 393 aaPredicted RBP22.8■■□□□ 1.24
GTF2A1-201ENST00000298173 LCORQ96JN0 433 aaPredicted RBP22.8■■□□□ 1.24
GTF2A1-201ENST00000298173 QRSL1Q9H0R6 528 aaKnown RBP22.8■■□□□ 1.24
GTF2A1-201ENST00000298173 YY1AP1Q9H869 796 aa22.8■■□□□ 1.24
GTF2A1-201ENST00000298173 SEC14L3Q9UDX4 400 aa22.8■■□□□ 1.24
GTF2A1-201ENST00000298173 CBLCQ9ULV8 474 aa22.8■■□□□ 1.24
GTF2A1-201ENST00000298173 C2orf92A0A1B0GVN3 265 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 STMND1H3BQB6 276 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 RAD1O60671 282 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 MT-ND1P03886 318 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 PTDSS1P48651 473 aaKnown RBP22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 SESN3P58005 492 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 SLC26A5P58743 744 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 HPCAP84074 193 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 CYP27C1Q4G0S4 372 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 TSEN54Q7Z6J9 526 aaKnown RBP22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 C17orf47Q8NEP4 570 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 GPR87Q9BY21 358 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 ZNF700Q9H0M5 742 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 NXF5Q9H1B4 397 aaKnown RBP22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 BAG5Q9UL15 447 aa22.79■■□□□ 1.24
GTF2A1-201ENST00000298173 CFAP54Q96N23 3096 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 IGHV1-45A0A0A0MS14 117 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 FRG2CA6NGY1 282 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 C21orf140B9A014 251 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 SEC24DO94855 1032 aaPredicted RBP22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 FESP07332 822 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 PABPC4LP0CB38 370 aaKnown RBP22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 RPS4Y1P22090 263 aaKnown RBP22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 CD82P27701 267 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 VLDLRP98155 873 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 PUM1Q14671 1186 aaKnown RBP eCLIP22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 SSPNQ14714 243 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 ATP6AP1Q15904 470 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 IFI44LQ53G44 452 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 KIRREL2Q6UWL6 708 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 ZAR1Q86SH2 424 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 AMIGO2Q86SJ2 522 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 ZNF619Q8N2I2 560 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 VMP1Q96GC9 406 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 IMMP1LQ96LU5 166 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 WWTR1Q9GZV5 400 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 ASCL3Q9NQ33 180 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 KCNE5Q9UJ90 142 aa22.78■■□□□ 1.24
GTF2A1-201ENST00000298173 AGAP5A6NIR3 686 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 TO15178 435 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 PRKNO60260 465 aaPredicted RBP22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 KIAA0513O60268 411 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 PRSS23O95084 383 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 EPPINO95925 133 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 F8A1P23610 371 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 RPS15P62841 145 aaKnown RBP22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 RNF4P78317 190 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 RSPO4Q2I0M5 234 aaPredicted RBP22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 SLC29A4Q7RTT9 530 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 ZDHHC21Q8IVQ6 265 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 BCORP1Q8N888 145 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 OR8K3Q8NH51 312 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 CHST2Q9Y4C5 530 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 SOCS6O14544 535 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 ALPPP05187 535 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 COX6A1P12074 109 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 RBMS1P29558 406 aaKnown RBP22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 RPS18P62269 152 aaKnown RBP22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 DNASE1L3Q13609 305 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 GPR68Q15743 365 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 NNATQ16517 81 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 DTX1Q86Y01 620 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 NACC2Q96BF6 587 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 CENPNQ96H22 339 aaPredicted RBP22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 ZNF354BQ96LW1 612 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 PINK1Q9BXM7 581 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 SEMA6AQ9H2E6 1030 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 NTN4Q9HB63 628 aa22.77■■□□□ 1.24
GTF2A1-201ENST00000298173 CLOCKO15516 846 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 FABP3P05413 133 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 TNFRSF1BP20333 461 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 CAMK2BQ13554 666 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 CPEB4Q17RY0 729 aaKnown RBP eCLIP22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 ZNF311Q5JNZ3 666 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 HSDL2Q6YN16 418 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 HMGN2P46Q86SG4 172 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 COMTD1Q86VU5 262 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 VRK2Q86Y07 508 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 OR11G2Q8NGC1 345 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 OR52P1PQ8NH57 321 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 NUBPLQ8TB37 319 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 SPPL2AQ8TCT8 520 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 GEMIN6Q8WXD5 167 aaKnown RBP22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 NKD1Q969G9 470 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 TP53INP1Q96A56 240 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 G6PC3Q9BUM1 346 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 IFT52Q9Y366 437 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 SH3GLB1Q9Y371 365 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 OR10H1Q9Y4A9 318 aa22.76■■□□□ 1.23
GTF2A1-201ENST00000298173 LOC101059948A0A1B0GTJ6 334 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 UGT2B17O75795 530 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 DXOO77932 396 aaKnown RBP22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 LGI1O95970 557 aa22.75■■□□□ 1.23
GTF2A1-201ENST00000298173 PRKAR1BP31321 381 aa22.75■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms