RNA–Protein interactions for RNA: ENST00000296026.4

CXCL3-201, Transcript of C-X-C motif chemokine ligand 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CXCL3, Length 1,075 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL3-201ENST00000296026 MID1IP1Q9NPA3 183 aa17.74■□□□□ 0.43
CXCL3-201ENST00000296026 NDRG3Q9UGV2 375 aa17.74■□□□□ 0.43
CXCL3-201ENST00000296026 ZFHX3Q15911 3703 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 A0A087WV62 115 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 A0A1W2PPR1 153 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 UBFD1O14562 309 aaKnown RBP17.73■□□□□ 0.43
CXCL3-201ENST00000296026 GSTA1P08263 222 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 PYGBP11216 843 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 PEPDP12955 493 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 HOXB4P17483 251 aaPredicted RBP17.73■□□□□ 0.43
CXCL3-201ENST00000296026 MC3RP41968 323 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 FOXA1P55317 472 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 CYP27C1Q4G0S4 372 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 TMEM107Q6UX40 140 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 FADS6Q8N9I5 356 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 WFDC11Q8NEX6 87 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 OR2M3Q8NG83 312 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 SMPDL3BQ92485 455 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 MIEF1Q9NQG6 463 aa17.73■□□□□ 0.43
CXCL3-201ENST00000296026 MAP1AP78559 2803 aaPredicted RBP17.73■□□□□ 0.43
CXCL3-201ENST00000296026 SLC22A20A6NK97 555 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 MSTNO14793 375 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 FADS1O60427 444 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 SMNDC1O75940 238 aaKnown RBP eCLIP17.72■□□□□ 0.43
CXCL3-201ENST00000296026 CRHP06850 196 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 HK1P19367 917 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 STX5Q13190 355 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 IMPG1Q17R60 797 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 RAET1LQ5VY80 246 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 OR2A2Q6IF42 318 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 FAM71E1Q6IPT2 247 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 MEIOBQ8N635 442 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 CNEP1R1Q8N9A8 125 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 PUM2Q8TB72 1066 aaKnown RBP eCLIP17.72■□□□□ 0.43
CXCL3-201ENST00000296026 STARD4Q96DR4 205 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 NEUROD4Q9HD90 331 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 SDHAF3Q9NRP4 125 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 TAS2R7Q9NYW3 318 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 FLRT3Q9NZU0 649 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 MED11Q9P086 117 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 TBK1Q9UHD2 729 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 GRID1Q9ULK0 1009 aa17.72■□□□□ 0.43
CXCL3-201ENST00000296026 C19orf53Q9UNZ5 99 aaPredicted RBP17.72■□□□□ 0.43
CXCL3-201ENST00000296026 POLR3HQ9Y535 204 aaPredicted RBP17.72■□□□□ 0.43
CXCL3-201ENST00000296026 UPK1AO00322 258 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 SLITRK5O94991 958 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 CD53P19397 219 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 FAM27E3Q08E93 113 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 SLC29A2Q14542 456 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 DECR1Q16698 335 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 VWA1Q6PCB0 445 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 FIG4Q92562 907 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 CCDC126Q96EE4 140 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 RTN4RQ9BZR6 473 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 GLIPR2Q9H4G4 154 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 MYNNQ9NPC7 610 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 DDX18Q9NVP1 670 aaKnown RBP17.71■□□□□ 0.43
CXCL3-201ENST00000296026 PSMC3IPQ9P2W1 217 aaPredicted RBP17.71■□□□□ 0.43
CXCL3-201ENST00000296026 DCDC2Q9UHG0 476 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 EMCNQ9ULC0 261 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 ABCG2Q9UNQ0 655 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 EIF3LQ9Y262 564 aaKnown RBP17.71■□□□□ 0.43
CXCL3-201ENST00000296026 ZNF337Q9Y3M9 751 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 TESMINQ9Y4I5 508 aa17.71■□□□□ 0.43
CXCL3-201ENST00000296026 ACANP16112 2415 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 G3V2L1 256 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 H0YC42 278 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 MYL2P10916 166 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 NTSP30990 170 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 HOXC12P31275 282 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 TPD52P55327 224 aaPredicted RBP17.7■□□□□ 0.42
CXCL3-201ENST00000296026 CLDN15P56746 228 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 EEFSECP57772 596 aaKnown RBP17.7■□□□□ 0.42
CXCL3-201ENST00000296026 GANABQ14697 944 aaKnown RBP17.7■□□□□ 0.42
CXCL3-201ENST00000296026 IFT20Q8IY31 132 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 OR2L13Q8N349 312 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 MZB1Q8WU39 189 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 PGM2Q96G03 612 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 FAM111AQ96PZ2 611 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 PTGES2Q9H7Z7 377 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 Q9N2J8 555 aa17.7■□□□□ 0.42
CXCL3-201ENST00000296026 BEX4Q9NWD9 120 aaPredicted RBP17.7■□□□□ 0.42
CXCL3-201ENST00000296026 FAM120CQ9NX05 1096 aaKnown RBP17.7■□□□□ 0.42
CXCL3-201ENST00000296026 SEC14L5O43304 696 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 PSMG1O95456 288 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 IL33O95760 270 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 FAM153BP0C7A2 387 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 CD79BP40259 229 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 RFX3P48380 749 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 SUCLG1P53597 346 aaKnown RBP17.69■□□□□ 0.42
CXCL3-201ENST00000296026 SIRPAP78324 504 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 ZNHIT3Q15649 155 aaPredicted RBP17.69■□□□□ 0.42
CXCL3-201ENST00000296026 FAM153CQ494X1 144 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 ZYG11AQ6WRX3 759 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 TRIM46Q7Z4K8 759 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 BTLAQ7Z6A9 289 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 MARCH3Q86UD3 253 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 OR5M1Q8NGP8 315 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 FAM76AQ8TAV0 307 aa17.69■□□□□ 0.42
CXCL3-201ENST00000296026 DUSP19Q8WTR2 217 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms