RNA–Protein interactions for RNA: ENST00000293441.5

SHANK1-201, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SHANK1, Length 6,643 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-201ENST00000293441 EFCAB7A8K855 629 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 UGDHO60701 494 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 AIMP2Q13155 320 aaKnown RBP16.35■□□□□ 0.21
SHANK1-201ENST00000293441 MOGSQ13724 837 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 GTDC1Q4AE62 458 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 PIGGQ5H8A4 983 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 ARMC1Q9NVT9 282 aa16.35■□□□□ 0.21
SHANK1-201ENST00000293441 RFXAPO00287 272 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 DDCP20711 480 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 WDR53Q7Z5U6 358 aaPredicted RBP16.34■□□□□ 0.21
SHANK1-201ENST00000293441 SYT14Q8NB59 555 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 CDS1Q92903 461 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 METTL2AQ96IZ6 378 aaKnown RBP16.34■□□□□ 0.21
SHANK1-201ENST00000293441 GPR83Q9NYM4 423 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 GMEB1Q9Y692 573 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 PET100P0DJ07 73 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 CTSCP53634 463 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 EEF1AKMT2Q5JPI9 291 aaKnown RBP16.34■□□□□ 0.21
SHANK1-201ENST00000293441 DCP2Q8IU60 420 aaKnown RBP16.34■□□□□ 0.21
SHANK1-201ENST00000293441 PIANPQ8IYJ0 282 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 OR6Q1Q8NGQ2 317 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 TAAR2Q9P1P5 351 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 G3V2L1 256 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 RUNDC3AQ59EK9 446 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 ELMOD2Q8IZ81 293 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 OR4K5Q8NGD3 323 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 OR5AK2Q8NH90 309 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 STOML3Q8TAV4 291 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 MGLLQ99685 303 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 COPZ2Q9P299 210 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 STUB1Q9UNE7 303 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 SYT7O43581 403 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 PEX14O75381 377 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 ATF4P18848 351 aaPredicted RBP16.34■□□□□ 0.21
SHANK1-201ENST00000293441 PSMB5P28074 263 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 SLC6A8P48029 635 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 MTNR1AP48039 350 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 FOXA1P55317 472 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 ERVFC1P60507 584 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 NPRL2Q8WTW4 380 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 TM9SF4Q92544 642 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 RTP4Q96DX8 246 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 CNIH4Q9P003 139 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 UCHL1P09936 223 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 S100A2P29034 98 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 CEACAM7Q14002 265 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 DCBLD2Q96PD2 775 aa16.34■□□□□ 0.21
SHANK1-201ENST00000293441 SOBPA7XYQ1 873 aa16.33■□□□□ 0.21
SHANK1-201ENST00000293441 KIAA0513O60268 411 aa16.33■□□□□ 0.21
SHANK1-201ENST00000293441 EEF1A1P68104 462 aaKnown RBP16.33■□□□□ 0.21
SHANK1-201ENST00000293441 CTBSQ01459 385 aa16.33■□□□□ 0.21
SHANK1-201ENST00000293441 HACD2Q6Y1H2 254 aa16.33■□□□□ 0.21
SHANK1-201ENST00000293441 PRR18Q8N4B5 295 aa16.33■□□□□ 0.21
SHANK1-201ENST00000293441 CRYGNQ8WXF5 182 aa16.33■□□□□ 0.21
SHANK1-201ENST00000293441 USP36Q9P275 1121 aaKnown RBP16.33■□□□□ 0.21
SHANK1-201ENST00000293441 SIT1Q9Y3P8 196 aa16.33■□□□□ 0.21
SHANK1-201ENST00000293441 F5H5K5 113 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 JRKO75564 520 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 ARHGEF15O94989 841 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 POU3F2P20265 443 aaPredicted RBP16.33■□□□□ 0.2
SHANK1-201ENST00000293441 GJA4P35212 333 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 LRRC26Q2I0M4 334 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 PLEKHN1Q494U1 663 aaPredicted RBP16.33■□□□□ 0.2
SHANK1-201ENST00000293441 TMEM31Q5JXX7 168 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 OR9Q2Q8NGE9 314 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 LMF1Q96S06 567 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 PAK1IP1Q9NWT1 392 aaPredicted RBP16.33■□□□□ 0.2
SHANK1-201ENST00000293441 ST14Q9Y5Y6 855 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 LOC102723532A0A0G2JNH3 316 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 PCDH17O14917 1159 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 HTR3BO95264 441 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 RAC2P15153 192 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 EFR3AQ14156 821 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 EXOSC7Q15024 291 aaKnown RBP16.33■□□□□ 0.2
SHANK1-201ENST00000293441 SPAG16Q8N0X2 631 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 HINT2Q9BX68 163 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 BCAT2O15382 392 aaPredicted RBP16.33■□□□□ 0.2
SHANK1-201ENST00000293441 GPR39O43194 453 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 HLA-FP30511 346 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 LSSP48449 732 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 UBE2UQ5VVX9 321 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 TRIM46Q7Z4K8 759 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 SLC35F2Q8IXU6 374 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 SMIM14Q96QK8 99 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 TMEM9Q9P0T7 183 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 SRPK3Q9UPE1 567 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 SULT2B1O00204 365 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 CNR2P34972 360 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 NUDT1P36639 197 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 ZNF140P52738 457 aaPredicted RBP16.33■□□□□ 0.2
SHANK1-201ENST00000293441 MOGQ16653 247 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 RTL10Q7L3V2 364 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 MEX3DQ86XN8 651 aaKnown RBP16.33■□□□□ 0.2
SHANK1-201ENST00000293441 Q8N402 240 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 CD300LFQ8TDQ1 290 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 FAM71F1Q96KD3 344 aaPredicted RBP16.33■□□□□ 0.2
SHANK1-201ENST00000293441 ZNF160Q9HCG1 818 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 C14orf119Q9NWQ9 140 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 PCDHA9Q9Y5H5 950 aa16.33■□□□□ 0.2
SHANK1-201ENST00000293441 WASH4PA8MWX3 477 aa16.32■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms