RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 BRF2Q9HAW0 419 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ING4Q9UNL4 249 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 VDAC3Q9Y277 283 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 WDR37Q9Y2I8 494 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ATG4BQ9Y4P1 393 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 C1orf226A1L170 272 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 MEN1O00255 615 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 HPGDSO60760 199 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 DHFRP00374 187 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 CHMP24386 653 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 HCCSP53701 268 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 FCHO2Q0JRZ9 810 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ALG11Q2TAA5 492 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 PYCR3Q53H96 274 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ENTPD8Q5MY95 495 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 C9orf50Q5SZB4 431 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 TMEM215Q68D42 235 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 KLHL24Q6TFL4 600 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 SLCO4C1Q6ZQN7 724 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 PAPD5Q8NDF8 572 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 GGHQ92820 318 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ZNF775Q96BV0 537 aaPredicted RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 COMMD4Q9H0A8 199 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 RETREG1Q9H6L5 497 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 DDX31Q9H8H2 851 aaKnown RBP4.51□□□□□ -1.69
UBR1-201ENST00000290650 ENAMQ9NRM1 1142 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 SPHK1Q9NYA1 384 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 ACTR10Q9NZ32 417 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 CKLFQ9UBR5 152 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 RABL2BQ9UNT1 228 aa4.51□□□□□ -1.69
UBR1-201ENST00000290650 CLCA1A8K7I4 914 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 H0YJX3 145 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 FAAHO00519 579 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 RNASET2O00584 256 aaKnown RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 PLPP1O14494 284 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 OR2B3O76000 313 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 TSPAN12O95859 305 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 ADORA3P0DMS8 318 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 PSMD4P55036 377 aaKnown RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 KCNAB1Q14722 419 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 DECR1Q16698 335 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 C4orf46Q504U0 113 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 DESI1Q6ICB0 168 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 PAQR6Q6TCH4 344 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 SERPINA11Q86U17 422 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 CBARPQ8N350 705 aaPredicted RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 OR52R1Q8NGF1 315 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 SUN3Q8TAQ9 357 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 HMGCLL1Q8TB92 370 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 SPRYD4Q8WW59 207 aaPredicted RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 YTHDF1Q9BYJ9 559 aaKnown RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 AK6Q9Y3D8 172 aaKnown RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 MTCL1Q9Y4B5 1905 aaKnown RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 LTBP1Q14766 1721 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 ARHGEF17Q96PE2 2063 aaPredicted RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 TRBV2A0A0J9YWF9 115 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 NUAK1O60285 661 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 SEMA3DO95025 777 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 HPRP00739 348 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 RENP00797 406 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 FURINP09958 794 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 HOXB3P14651 431 aaPredicted RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 SNU13P55769 128 aaKnown RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 ENTHD1Q8IYW4 607 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 ANKK1Q8NFD2 765 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 VN1R2Q8NFZ6 395 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 ZNF420Q8TAQ5 688 aaPredicted RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 FAM3CQ92520 227 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 ISG20Q96AZ6 181 aaKnown RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 LRIG1Q96JA1 1093 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 ELF4Q99607 663 aaPredicted RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 METTL7AQ9H8H3 244 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 TRIM36Q9NQ86 728 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 TAS2R7Q9NYW3 318 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 TAAR2Q9P1P5 351 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 NLKQ9UBE8 527 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 RABL2AQ9UBK7 228 aaPredicted RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 FTSJ1Q9UET6 329 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 HCN2Q9UL51 889 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 TVP23AA6NH52 213 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 MAGEB4O15481 346 aaPredicted RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 UBXN7O94888 489 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 FUT1P19526 365 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 ARFIP1P53367 373 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 GALK2Q01415 458 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 PON3Q15166 354 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 CDKN3Q16667 212 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 SFRP4Q6FHJ7 346 aaPredicted RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 LEG1Q6P5S2 330 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 LRFN4Q6PJG9 635 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 BEST4Q8NFU0 473 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 OR5K2Q8NHB8 316 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 PCNPQ8WW12 178 aaKnown RBP4.5□□□□□ -1.69
UBR1-201ENST00000290650 LMF1Q96S06 567 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 SLC2A11Q9BYW1 496 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 SLC22A4Q9H015 551 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 ACOT13Q9NPJ3 140 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 C14orf105Q9NVL8 296 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 IL37Q9NZH6 218 aa4.5□□□□□ -1.69
UBR1-201ENST00000290650 ENPP5Q9UJA9 477 aa4.5□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms