RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 CDKN2CP42773 168 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 OR1D4P47884 311 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 KHKP50053 298 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 CD47Q08722 323 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 MGAT2Q10469 447 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 ECH1Q13011 328 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 PRAMEF8Q5VWM4 474 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 PRAMEF7Q5VXH5 474 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 NANOGP8Q6NSW7 305 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 PTRH1Q86Y79 214 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 CLECL1Q8IZS7 167 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 PARP8Q8N3A8 854 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 FBXW8Q8N3Y1 598 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 TEX19Q8NA77 164 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC38A9Q8NBW4 561 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 OR52E4Q8NGH9 312 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 OR52J3Q8NH60 311 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 OIT3Q8WWZ8 545 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 CADM1Q9BY67 442 aaKnown RBP7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 ALG2Q9H553 416 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 NANOGQ9H9S0 305 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 MAU2Q9Y6X3 613 aa7.86□□□□□ -1.15
PTPDC1-201ENST00000288976 UBTFL6P0CB48 400 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC6A9P48067 706 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 PGM2L1Q6PCE3 622 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 ATCAYQ86WG3 371 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC35A5Q9BS91 424 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 TMEM38AQ9H6F2 299 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 CXorf36Q9H7Y0 433 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 TMEM27Q9HBJ8 222 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 STMND1H3BQB6 276 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 F10P00742 488 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 MT-ND1P03886 318 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 HTR1EP28566 365 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 STAT5AP42229 794 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 EIF1AXP47813 144 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 RNF144AP50876 292 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC25A3Q00325 362 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 RBBP4Q09028 425 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 FUT7Q11130 342 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 TARDBPQ13148 414 aaKnown RBP eCLIP7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 MADCAM1Q13477 382 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 GAB1Q13480 694 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 SYT16Q17RD7 645 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 GPAT4Q86UL3 456 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 LGI4Q8N135 537 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 GALNT6Q8NCL4 622 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 C17orf47Q8NEP4 570 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 OR6N1Q8NGY5 312 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 FBXO27Q8NI29 283 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 STT3BQ8TCJ2 826 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 ZDHHC19Q8WVZ1 309 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 ELP4Q96EB1 424 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC46A1Q96NT5 459 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 SPSB2Q99619 263 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 LMF2Q9BU23 707 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 VN1R1Q9GZP7 353 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 VAPAQ9P0L0 249 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 CFL2Q9Y281 166 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 ITIH1P19827 911 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 GZMMP51124 257 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 GABREP78334 506 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 ITGADQ13349 1161 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 AP1ARQ63HQ0 302 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 KCTD8Q6ZWB6 473 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC29A4Q7RTT9 530 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 ANKRD37Q7Z713 158 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 GALNT12Q8IXK2 581 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 GOLM1Q8NBJ4 401 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 UCN3Q969E3 161 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 NXPE2Q96DL1 559 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 STACQ99469 402 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 ALOXE3Q9BYJ1 711 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 YIPF3Q9GZM5 350 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 SEMA6AQ9H2E6 1030 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 KAT8Q9H7Z6 458 aaKnown RBP7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 TPT1P8Q9HAU6 139 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 ZBTB20Q9HC78 741 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 A4GALTQ9NPC4 353 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 NECTIN3Q9NQS3 549 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 FOXJ2Q9P0K8 574 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 CTSFQ9UBX1 484 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 PCDHGB3Q9Y5G1 929 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 TTLL8A6PVC2 850 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 TGFBR3LH3BV60 316 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 TLX3O43711 291 aaPredicted RBP7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 MAN1A2O60476 641 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 PRAMEF2O60811 474 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 ALOX12BO75342 701 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 TNFSF15O95150 251 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 LDLRP01130 860 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 GNALP38405 381 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 CAPZA1P52907 286 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 FOXC1Q12948 553 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 CHAF1BQ13112 559 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 MTX3Q5HYI7 312 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 C3orf38Q5JPI3 329 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 PRAMEF17Q5VTA0 474 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 SLC15A3Q8IY34 581 aa7.85□□□□□ -1.15
PTPDC1-201ENST00000288976 OR9A2Q8NGT5 310 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms